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1.A.9.1.12
Nicotinic acetylcholine receptor with three subunits, non-alpha subunit ShAR2beta of 545 aas, as well as two additional "non-alpha subunits of 714 and 736 aas, respectively, all with 6 TMSs, 1 N-terminal, 4 central, and 1 C-terminal (Bentley et al. 2007). 

Accession Number:A6QL44
Protein Name:Nicotinic acetylcholine receptor non-alpha subunit ShAR2beta
Length:545
Molecular Weight:63706.00
Species:Schistosoma haematobium (Blood fluke) [6185]
Number of TMSs:5
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate inorganic cations

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MLFSSGCIVV LVYLFLSPTV RSRNHAETES SMEKSLIRVI LERYKQNGVV GRPVNNSRVK 
61:	MVVQYGLQMI QLLGLDENKQ VLRTNCWAVY RWSDSLLKWN ASQYGGIKEL RIFPHQIWTP 
121:	DIKLYNFADE RLQEFREGRL VVDSSGNILW IQQALFRSTC QVEITYFPFD SQVCMLEFGS 
181:	MAYDKTQLDL DWWIPDGSDT PMPYVDFSDY VPANDWFTDG EAERHIRHED RVHQLRSVKR 
241:	YRVREHLIGS TKHERYYPVL RYLIRIYRNP SFHLFILIVP CLLLSLLSLV VFWLPPDSAA 
301:	KMMLGINIFV GFFVLLLLLA KSMPSAIKNF PIIGIFFCLN MVMVTLSIFM ATWVVNLFYK 
361:	GNEGQAVPFW IRRFIIDGLG RMLGIRQIIP LIDKSQRLDP KISSLNISIN ETNSIQMNYH 
421:	DNYSMINDDD NNQINNFSNK KQLNHNIHLI NEIVSNHINE MKHNELKQYS CHIKEFLQHI 
481:	NIKQIKSSHK NSLGTEWRIL ALIIDRLFFI IYLFTLITIA GIVILKTDLP DTTLQLINRN 
541:	VVDLQ