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3.A.1.3.28
Putative amino acid uptake porter, YckIJK; deletion of YckK (substrate binding protein) increases sensitivity to the antimicrobial peptide, cecropin (Chen et al. 2015). 

Accession Number:B8F897
Protein Name:ABC-type amino acid transport system, permease component
Length:212
Molecular Weight:23524.00
Species:Haemophilus parasuis serovar 5 (strain SH0165) [557723]
Number of TMSs:5
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Amino acids

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MVQAAFLVSI PLAIASFIIG MAIAVGVALV RVTSVNSAFH RLLLWFVKGY ISIIRGTPML 
61:	VQICIVFYGL PAIGIFIDPI PAAIIGFSIN IGAYGSETIR AAILSVPKGQ WEAGYTIGMT 
121:	YMQTFRRIIA PQAFRVAVPP LSNTFIGLFK DTSLASVVTV TEMFRVAQQV ANMSYDFLPV 
181:	YIEAGLIYWC FCWVLFFIQA RLEKRFDRYV AK