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2.A.6.3.8
Efflux pump for antifungal and antibacterial syringopeptin and syringmycin lipodepsipeptides (see 1.D.35) as well as acriflavin, erythromycin and tetracycline, PseABC (Kang and Gross 2005).

Accession Number:L8NGR5
Protein Name:RND-type efflux system, membrane fusion protein (MFP) subunit PseB
Length:367
Molecular Weight:38754.00
Species:Pseudomonas syringae pv. syringae B64 [1260626]
Number of TMSs:1
Substrate Syringopeptin, Syringmycin lipodepsipeptides, acriflavin, erythromycin, tetracycline

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External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MRKIHVYGLL ALAALSVSGW ILFGRAEPTP AAVAAPATSL TVEAVQPHRE DWPQELVASG 
61:	ALAPWQEAVI SAETGSLRIA SLKADIGDQV KKGQVLATLA DDSVLAEENK QKSAVAQATA 
121:	QLQEARSNAR RAAVVGQSGA LSEQQLEEYR VKVQTAEANL ASANADLRSI RIKLKQTRIV 
181:	AVDDGIISGR KALLGDVVSA GSEMFRMIRD GRIEWQAELD AQQLPGVKPG QLARVMLPGG 
241:	IEVQGRVRLV SPVLDGKTSR ALVYVSLPVG AVARAGMYAS GRIELPSSPA LTVPDTSVIL 
301:	RDGHSYVFVL GKDMRVSQHV VEIGRRRGSA LEIVGGLAEQ AQIVCSGGAF LNDGASVTLV 
361:	NAEARAQ