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3.A.1.1.2
The galactooligosaccharide (transports the di, tri and tetrasaccharides) uptake porter GanOPQ (GanSPQ; MalEFG) functioning with the energizing ATPase MsmX (see 3.A.1.1.26).  These oligosaccharides are derived from galactans and arabinogalactans, compenents of pectins in plant cell walls (Watzlawick et al. 2016).

Accession Number:O07011
Protein Name:Putative arabinogalactan oligomer transport system permease protein ganQ
Length:283
Molecular Weight:31305.00
Species:Bacillus subtilis [1423]
Number of TMSs:6
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Galactooligosaccharides

Cross database links:

HEGENOM: HBG729451 HBG729451 HBG729451 HBG729451 HBG729451 HBG729451 HBG729451 HBG729451 HBG729451 HBG729451 HBG729451
Entrez Gene ID: 937991   
Pfam: PF00528   
KEGG: bsu:BSU34140    bsu:BSU34140    bsu:BSU34140    bsu:BSU34140    bsu:BSU34140   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005215 F:transporter activity
GO:0008643 P:carbohydrate transport

References (4)

[1] “The complete genome sequence of the Gram-positive bacterium Bacillus subtilis.”  Kunst F.et.al.   9384377
[2] “Bioinformatic, genetic, and biochemical evidence that some glycoside hydrolase family 42 beta-galactosidases are arabinogalactan type I oligomer hydrolases.”  Shipkowski S.et.al.   17056685
[3] “The complete genome sequence of the Gram-positive bacterium Bacillus subtilis.”  Kunst F.et.al.   9384377
[4] “Bioinformatic, genetic, and biochemical evidence that some glycoside hydrolase family 42 beta-galactosidases are arabinogalactan type I oligomer hydrolases.”  Shipkowski S.et.al.   17056685

External Searches:

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  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MLADMKVRRY IRLLFSYLLL AFMAVIIVYP LLWTAGASFN PGNSLISTSI IPKHPTFDHY 
61:	KELFAGKESL QYVQWYVNSM KISLFTMAGS LLCVTFTAYA FSRFRFKGRK YALTLFLLLQ 
121:	MIPQFSALIA LFVLAQILGM INSHWLLILL YIGGLIPMNT YLMKGYMDSI PMDLDESAKI 
181:	DGASSTRIFF QIILPLSKPM AAVVAMNGFT GPLGDFVLSS TILRTPESYT LPVGLFNLVN 
241:	DVMGASYTTF AAGALLISIP VAVIFIMLQK NFVSGLTAGG TKG