TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.1.125.6
Putative ABC transporter, LolCDE, with three components, similar to (but substantially different from) LolC, LolD and LolE of E. coli. The three genes encoding these proteins are adjectent to each other on the bacteria chromosome, but there is no direct experimental evidence that they function together as lipoprotein exporters.

Accession Number:OLS26561
Protein Name:OLS26561.1 hypothetical protein HeimC3_08800 [Candidatus Heimdallarchaeota archaeon LC_3]
Length:1107
Molecular Weight:
Species:Candidatus Heimdallarchaeota archaeon LC_3 [1841598]
Number of TMSs:12
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MVKPTSIIFG LKTVWRRKQK NLFAIFAIAL GVSLIAGISI TRNSLGEGFG VFFTYSLGER 
61:	DGSVSSVNGF IDEPWADAIG NRLVTDVDDV VAFTTSFSLP ISTSTDEGQI NVVTWLIGIN 
121:	QTEDSAVFGR LITTNGDTVS VAGVAAGEAY VGKTLADDLL LTTDVSDEER SNQFDYSLSI 
181:	GPITIEKTLT VKGIIKNEER GATGGNLAVY TNLNNIQEEI GNVLVMGGYP VPHPITLISL 
241:	KFSDNIKTVD DGDELVEAMK DSLNDLPVVL GIGGVETLII SAERVTIKNF GKVLSAQLSD 
301:	MLMIFGFIII FAGLLLIVNI QFMTVEDRQQ QTGIQRAIGT QRRQIVIANL TEFLVTGIIG 
361:	GLVGIIGGMI YSQLLILAFG NAFEFDGSLI PVIIDTDVMI MAFFTGFFLA LLTGLLPSIR 
421:	ASRIHIVETL RGVENKAESI ERGTGMMGLY VGTILTLLGI VSLAGLNGQP WDFPNAYKNI 
481:	DNAEAIFFAV TFLLVGLSVL LSYFVSKDLA LNIAALLLVL LPVVNALFIF GIIEEGVGSG 
541:	GMNLFLGMIL SMIAGSILLI GINLHRVADF AEKLFSRTYS AVAMLSFRQM ASQRTRSTLT 
601:	FSIFAVILTL NIFLASFAYS MRYGSVNQVE AQAGGSDILI FSGQAFNSTT TTIFLNGLKD 
661:	TSKFPGITWA QAFPNAIDYN VSLTTNGEET DDLDDTETWR LNFFAINNQS LWESEQDFLD 
721:	NKPKLNLLIE TEKIDTTKFT FSADYSEGFE IDGRVGFGDR HKDSNLDENK RFWSALAKNE 
781:	YVTDKSDQKS KPFIVVSPII DPEASGLITY LKKVGDSVWL SLKDGTYKEF VIAAHSEGNP 
841:	LFDARYLQGI EPGPSGSQGF GAFISETEAR DLKVFNPTEN ISLLDQNSHF LVSGKDNVEI 
901:	TSKENVKLAQ DIEAWSNGVD TVTKDGSTFD TFRKVFGFYG IVTISIYELY EILFDGMFRM 
961:	FGFLQIFTSF GFIVGVLGLL VVSVRSVQER KREIGMMRSI GLKSNDVLIS IMLELSVMGV 
1021:	IGLAIGIFNG NVLGLGIVRL MLGVDAPFLI PWFDPGMVIF GISLPGGPGS ILFYTVLTLG 
1081:	AAFVAAIIPG RSASKIPPSE ALRYTG