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3.D.1.6.4
The green algal H+ translocating NADH dehydrogenase (NDH) complex (42 subunits; 33 included here) (Cardol et al., 2004)

Accession Number:P08740
Protein Name:ND2 (42.4) (NuoN)
Length:382
Molecular Weight:42383.00
Species:Chlamydomonas reinhardtii [3055]
Number of TMSs:11
Location1 / Topology2 / Orientation3: Mitochondrion inner membrane1 / Multi-pass membrane protein2
Substrate H+

Cross database links:

RefSeq: NP_042568.1   
Entrez Gene ID: 801491   
Pfam: PF00361   
KEGG: cre:ChrepMp05   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005743 C:mitochondrial inner membrane
GO:0070469 C:respiratory chain
GO:0008137 F:NADH dehydrogenase (ubiquinone) activity
GO:0042773 P:ATP synthesis coupled electron transport
GO:0006810 P:transport

References (3)

[1] “Nucleotide sequence of a protein coding region in Chlamydomonas reinhardtii mitochondrial DNA.”  Boer P.H.et.al.   3020517
[2] “Nucleotide sequence of Chlamydomonas reinhardtii mitochondrial genes coding for subunit 6 of NADH dehydrogenase and tRNATrp.”  Ma D.-P.et.al.   3205746
[3] “Nucleotide sequence of a region encoding subunit 6 of NADH dehydrogenase (ND6) and tRNA(Trp) in Chlamydomonas reinhardtii mitochondrial DNA.”  Boer P.H.et.al.   2734113

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MIELDLCFGL LLLILFGLLS LRNGHVSLAH IRFICQCWLV MITPLEVQDF ALCILTVVLL 
61:	QSFHSFEALL FLLLAYIGQL YMMHSCNLVS FYVCLEAQTL CVVVLCGLLA RGASTSFSVE 
121:	AALKFLLLSA MVSGMALFWF SAMYQRTGSL DMVGQETFWI LLVMLFKLGV APMHMWSVDL 
181:	YGSIPKSLLL YLSTAPKLSL FTFWASSWHH DFSVGVFILF SMFIGSIGAY GQPALRSLFA 
241:	YSTINEIGLL LLAVETAGFH TLYQHLGIYI ITQLLLWNLT DKRLFALCAV SLAGLPPFAG 
301:	FFGKAWIFWH AMSVQAFSLL AAALFCTLLS LVYYLRVIRL FWTAPVHTAA SFTGAPNQTT 
361:	LTSACAVALA FAPVMLVKPF VI