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3.D.1.6.4
The green algal H+ translocating NADH dehydrogenase (NDH) complex (42 subunits; 33 included here) (Cardol et al., 2004)

Accession Number:P11658
Protein Name:ND1 (31.6) (NuoH)
Length:292
Molecular Weight:31590.00
Species:Chlamydomonas reinhardtii [3055]
Number of TMSs:8
Location1 / Topology2 / Orientation3: Mitochondrion inner membrane1 / Multi-pass membrane protein2
Substrate H+

Cross database links:

RefSeq: NP_042570.1   
Entrez Gene ID: 801499   
Pfam: PF00146   
KEGG: cre:ChrepMp07   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005743 C:mitochondrial inner membrane
GO:0070469 C:respiratory chain
GO:0008137 F:NADH dehydrogenase (ubiquinone) activity
GO:0022900 P:electron transport chain
GO:0006810 P:transport

References (1)

[1] “Genes encoding a subunit of respiratory NADH dehydrogenase (ND1) and a reverse transcriptase-like protein (RTL) are linked to ribosomal RNA gene pieces in Chlamydomonas reinhardtii mitochondrial DNA.”  Boer P.H.et.al.   2463163

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MIVASILILI VPVLLSVAMF TLAERTVMAS MQRRFGPQVS GISGLLQPFW DGLKLGVKEP 
61:	VLPDSSSAGA FAASPMISFV LSQVAWVGIC ISDASFQGLV IMAISSLAVY GVMLAGWASN 
121:	SKYAFLGCLR SVALMVSYEL SLGAALLSIG LFVTDGTGMK CLNFAEMPTT PQYAMLPLCL 
181:	IFLVCILAET KRDPFDLPEA ELVAGYNVEY SSLGFALFFI AEYANMAVMS AIASIYFLGG 
241:	FSALKITALF FAFVWTRGTL PRYRYDQFMR LGWKAFLPLT LAFFALHASV AI