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1.A.30.1.2
The flagellar motor (smf-dependent) (PomAB; MotXY) (Okabe et al., 2005)

Accession Number:P74944
Protein Name:MotY
Length:293
Molecular Weight:33484.00
Species:Vibrio alginolyticus [663]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Membrane1 / Single-pass type I membrane protein2
Substrate Na+

Cross database links:

Pfam: PF00691   

Gene Ontology

GO:0009288 C:bacterial-type flagellum
GO:0009279 C:cell outer membrane
GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0003774 F:motor activity
GO:0001539 P:ciliary or flagellar motility

References (1)

[1] “Cloning and characterization of motY, a gene coding for a component of the sodium-driven flagellar motor in Vibrio alginolyticus.”  Okunishi I.et.al.   8636046
Structure:
2ZF8     

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKKWLITSGV VFSLFSTSSF AVMGKRYVAT PQQSQWEMVV NTPLECQLVH PIPSFGDAVF 
61:	SSRANKKINL DFELKMRRPM GETRNVSLIS MPPPWRPGEH ADRITNLKFF KQFDGYVGGQ 
121:	TAWGILSELE KGRYPTFSYQ DWQSRDQRIE VALSSVLFQN KYNAFSDCIS NLLKYSFEDI 
181:	AFTILHYERQ GDQLTKASKK RLSQIADYIR HNQDIDLVLV ATYTDSTDGK SASQSLSERR 
241:	AESLRDYFQS LGLPEDRIQV QGYGKRRPIA DNGSPIGKDK NRRVVISLGR TQV