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3.A.1.112.3
Bacteriocin (lactococcin) exporter. 

Accession Number:Q00564
Protein Name:Lactococcin-A transport/processing ATP-binding protein LcnC
Length:715
Molecular Weight:79810.00
Species:Lactococcus lactis (subsp [1360]
Number of TMSs:8
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Lactococcin

Cross database links:

Pfam: PF00664    PF00005    PF03412   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005524 F:ATP binding
GO:0042626 F:ATPase activity, coupled to transmembrane m...
GO:0008234 F:cysteine-type peptidase activity
GO:0019534 F:toxin transporter activity
GO:0043213 P:bacteriocin transport
GO:0006508 P:proteolysis
GO:0055085 P:transmembrane transport

References (1)

[1] “Molecular analyses of the lactococcin A gene cluster from Lactococcus lactis subsp. lactis biovar diacetylactis WM4.”  Stoddard G.W.et.al.   1622271

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MKFKKKNYTS QVDEMDCGCA ALSMILKSYG TEKSLASLRL LAGTTIEGTS ALGIKKAAEI 
61:	LEFSVQALRT DASLFEMKNA PYPFIAHVIK DQKYPHYYVI TGANKNSVFI ADPDPTIKMT 
121:	KLSKEAFLSE WTGISLFLST TPSYHPTKEK ASSLLSFIPI ITRQKKVILN IVIASFIVTL 
181:	INILGSYYLQ SMIDSYIPNA LMGTLGIISV GLLLTYIIQQ VLEFAKAFLL NVLSQRLAID 
241:	VILSYIRHIF QLPMSFFSTR RTGEITSRFS DASSILDAIA STILSLFLDL TIVVMTGLIL 
301:	GLQNMQLFLL VLLAIPLYIV VIIIFTPLFE KQNHEVMQTN AVLNSSIIED INGIETIKAL 
361:	ASEQERYQKI DYEFASYLKK AFTLQKSEAI QGLIKAIIQL TLSVTILWFG ATLVISQKIT 
421:	LGQLITFNAL LSYFTNPITN IINLQTKLQK ARVANERLNE VYLVPSEFEE KKTELSLSHF 
481:	NLNMSDISYQ YGFGRKVLSE IELSIKENEK LTIVGMSGSG KSTLVKLLVN FFQPTSGTIT 
541:	LGGIDLQQFD KHQLRRLINY LPQQPYIFTG SILDNLLLGA NENASQEEIL KAVELAEIRA 
601:	DIEQMQLGYQ TELSSDASSL SGGQKQRIAL ARALLSPAKI LILDEATSNL DMITEKKILK 
661:	NLLPLDKTII FIAHRLSVAE MSHRIIVVDQ GKVIESGSHV DLLAQNGFYE QLYHN