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3.A.1.124.6
CprABC antimicrobial peptide resistance ABC exporter.  Exports both mammalian and bacterial toxic peptides (McBride and Sonenshein 2011).

Accession Number:Q18BL6
Protein Name:ABC-type transport system,lantibiotic/multidrug-family permease
Length:252
Molecular Weight:28481.00
Species:Peptoclostridium difficile (strain 630) [272563]
Number of TMSs:6
Substrate Antimicrobial peptides

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MRQLIRIFCS DLIKLKRNFI ILMHICIALM GMGLFLWYYK VSGADNILKI VGYLQVIAIA 
61:	FPLLSGVVCS MFVEQEYYAG NYKHMLTTSN PKYLTLISKY IILVCLGFVA TLVSVLGFKF 
121:	GISKAYFTSS FYMISILILI ACNLFEYILH LFLSLRFGKG TSIGVGIVEM LLSALLLTGL 
181:	GSGIWQYFPC AWGVRFITIW SSFSSSKTVE YIKVESIKSY QSTGLICGFV TILAFVILCI 
241:	WFSKWEGKKS EE