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3.A.1.125.3
Duf214 protein (843aas; 10TMSs:1+6+3)

Accession Number:Q2J9P4
Protein Name:Duf214
Length:843
Molecular Weight:86856.00
Species:Frankia sp. (strain CcI3) [106370]
Number of TMSs:10
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

eggNOG: COG0577
HEGENOM: HBG676671
RefSeq: YP_481630.1    YP_481631.1    YP_481727.1   
Entrez Gene ID: 3904681    3904682    3906309   
Pfam: PF02687   
KEGG: fra:Francci3_26   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane

References (1)

[1] “Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography.”  Normand P.et.al.   17151343

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MLRATLKSLL ARKVRLVLSM LAVVAGVSFV TGTLVLTDTL NRTFDTLFAD INKNVSVAVR 
61:	SVNAIDPTSD VGRPPLPASL VSTAAGVDGV RVAVGKVNGQ AVLVNPATGK PSNTNGAPGI 
121:	GINWTGGQPT SAEEIAEGRP PGPGEIVVDR ATAKKLHLSL GAKISVQTKG PPARYTLVGT 
181:	FRIGGQDSLG GAAVTAFDTA TAQRVLLAPD RFSAIHLAAG PGLTQEELRA RVAAALPPGV 
241:	EAITGRQLAD ESASAVQNAV SGFSTFLLIF AAISVFVGAF IIFNTFTMLV AQRVRELALL 
301:	RAIGASKRQV QVSLQVEAAL VGFAGATVGL VSGAGLALLL RVAVGVFGVA LPSGALVFRP 
361:	RTVVIAYAVG VLITAAAAFV PARKAASVPP IAAMRETYVL PTRSLRSRAI AGSVLTALGI 
421:	VLLILGTASA GKPGATAVGV GAAGIFLGVA TLSPLLSGPI TRVLGAPLAR MFGATGRLGR 
481:	ENAMRNPRRT ASTASALMIG LALVSAFSVL GQSIKESVRE TVSNSLGADF YLTPQNFGQG 
541:	FSGEVARELA GKPGIEIATG LRGGLVKISG QSSQVLAGDP AGLVKMLAIK EVTGDVHALG 
601:	DGTILAEDST AADHQLRVGQ KVPVTFADGR AELTLVGTYQ KSQVAGKWII STSEFARHST 
661:	DDLDLFVLVK RASGADPAMV RAEIATVVKS FATVEVRDQS EFVAQQEKQV DQLLGFIYVL 
721:	LALAVIIALF GIVNTLALSV IERTREIGLL RAVGMTRSQM RLMVILESVI ISVFGAVLGV 
781:	VVGSIFGWAL TKALASLGIS TFAYPVRTIL LVVLTGAILG VLAAVFPARR AARMDVLRAI 
841:	SAV