TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.1.125.3
Duf214 protein (843aas; 10TMSs:1+6+3)

Accession Number:Q2J9P5
Protein Name:ABC type
Length:445
Molecular Weight:47668.00
Species:Frankia sp. (strain CcI3) [106370]
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

eggNOG: COG1136
HEGENOM: HBG758042
RefSeq: YP_481726.1   
Entrez Gene ID: 3906308   
Pfam: PF00005   
KEGG: fra:Francci3_26   

Gene Ontology

GO:0005524 F:ATP binding
GO:0016887 F:ATPase activity

References (1)

[1] “Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography.”  Normand P.et.al.   17151343

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MARRTGSSRG GKRGAVAGSP PGREDRGSRP GEYGAGRDGR VPEHPGGRRE DGPDAAPAAR 
61:	AARLTKVYGS GDTTVTALRE IDLAFPRGRF TAIMGPSGSG KSTLMHCLAG LDTVTRGRVF 
121:	IGNVDLSRLS DKQLTRLRRD RIGFIFQQFN LLPTLTAAEN ITLPLSIAGR SPDRAWMRTV 
181:	IDAVGLAPRL KHRPSELSGG QQQRVACARA LVTRPEIIFA DEPTGNLDSR SGAEVLSFLR 
241:	DSVSELGQTI VMVTHDATAA SYSDEVIFLA DGRLVDAIAN PTAEEVLDRM KHLDAAAGGL 
301:	AADGEIADDR DDHNDTDGRY GPAGDYDDYA YPDQAYPDQA YPDQAYPDQP TYGRDEHDPY 
361:	QGHYPERRTG QFEAIPAPDL GPDAGGQPAS RRVGGTRHGE EYYSGRSHHR PVPRPGGGPP 
421:	LTDPGRVDGG GDSYHPDGTE PAGWA