TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.2.2.8
V-type ATPase with 13 subunits

Accession Number:Q3SDC5
Protein Name:Chromosome undetermined scaffold_125, whole genome shotgun sequence
Length:831
Molecular Weight:96490.00
Species:Paramecium tetraurelia [5888]
Number of TMSs:6
Substrate H+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSFFRSKQMK YYSLVIPRES AWVVMDQLGR LGQLHIIDYD PLLPMMNRPF ANYVKRCDES 
61:	LFKLNGLDAI LKQFKKKLIY CEDTQKLLDH FRDIQNSRQK PGHTYFDELE QEIDKKKSNI 
121:	QEIVDSITEQ KLVLEKAKEI LGKQMFSQST PHNLSDYQQL KFGQLIGVID KEDETRFKRI 
181:	MFRITKGNAW VNIVDLLPEK QHHQIKTSID LNRAQQPRCL YVVVYPGMND QSTLKQKLLK 
241:	VCDSFSKNRI EYPNSQESMD NKLRELSIQI SEAQSLIQMT KKQLDVTLDE LVKEQNGCNC 
301:	SYFEQLRLYV LKEKYLYVNL NYLMMQGSIF TGYFWLPEGL EVQVEDKLRN AMQNSIDRFP 
361:	TGQIQELKPK PGDLAPTYFN LNEVTMPFQE IVNTYGVPRY QEVNPGLFTV ITFPFLFGVM 
421:	FADIAHGFLL LLCGLYVIVW KNQLKKEADS MFNAMIPFRY LLALMGLFAF YNGLIYNDYL 
481:	SISLDLFGSC YYPKHEEWER EQNCVYPFGI DPVWLASGSS LNFMNSYKMK LAVILGVIHM 
541:	LFGILMKGAN TLYFRNYLDF FCEFIPQLLF MVCTFGWMDF LIIMKWLNVY PNGKDPSIIE 
601:	TMINQVLKPT DEAESPVFPN NASLQLSVTQ LLTVIAVVSI PWMLFPKPLI LGSGQKKHKV 
661:	QANEQQYQKL ISEKQGSELE IDPQQFRKDL QNAASSRSVD HSEQDHDSGE IWVHQMIETI 
721:	EFVLGGISNT ASYLRLWALS LAHGQLAEVF YDMCLAGNLD MGGIMGGLMS GYFYIVFALL 
781:	TFGVLMMMDV MECFLHALRL HWVEFQSKFY KADGYLFVGF SYNKMLQEHL K