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3.D.1.6.3
The higher plant H+ translocating NADH dehydrogenase (NDH) complex (41 subunits; 23 included here) (Cardol et al., 2004)

Accession Number:Q42577
Protein Name:24 (NuoB)
Length:218
Molecular Weight:24044.00
Species:Arabidopsis thaliana (Mouse-ear cress) [3702]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Mitochondrion1
Substrate H+

Cross database links:

Genevestigator: Q42577
eggNOG: KOG1687
HEGENOM: HBG553221
RefSeq: NP_196738.1   
Entrez Gene ID: 831049   
Pfam: PF01058   
BioCyc: MetaCyc:AT5G11770-MONOMER   
KEGG: ath:AT5G11770   

Gene Ontology

GO:0005739 C:mitochondrion
GO:0045271 C:respiratory chain complex I
GO:0051539 F:4 iron, 4 sulfur cluster binding
GO:0008137 F:NADH dehydrogenase (ubiquinone) activity
GO:0048038 F:quinone binding
GO:0008270 F:zinc ion binding
GO:0022900 P:electron transport chain
GO:0006810 P:transport

References (4)

[1] “The plant mitochondrial 22 kDa (PSST) subunit of respiratory chain complex I is encoded by a nuclear gene with enhanced transcript levels in flowers.”  Heiser V.et.al.   8914535
[2] “Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.”  Tabata S.et.al.   11130714
[3] “Empirical analysis of transcriptional activity in the Arabidopsis genome.”  Yamada K.et.al.   14593172
[4] “Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins.”  Heazlewood J.L.et.al.   14671022

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MAMITRNTAT RLPLLLQSQR AVAAASVSHL HTSLPALSPS TSPTSYTRPG PPSTSPPPPG 
61:	LSKAAEFVIS KVDDLMNWAR TGSIWPMTFG LACCAVEMMH TGAARYDLDR FGIIFRPSPR 
121:	QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP 
181:	VDIYVPGCPP TAEALLYGLL QLQKKINRRK DFLHWWNK