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3.A.1.133.1
The modified YydF* peptide exporter, YydIJ (Butcher et al., 2007)

Accession Number:Q45592
Protein Name:YydJ
Length:240
Molecular Weight:27505.00
Species:Bacillus subtilis [1423]
Number of TMSs:6
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate peptides

Cross database links:

HEGENOM: HBG343305
RefSeq: NP_391894.1   
Entrez Gene ID: 937730   
BioCyc: SUBTI:BSU40140-MONOMER   
KEGG: bsu:BSU40140   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane

References (4)

[1] “Sequence analysis of the 36-kb region between gntZ and trnY genes of Bacillus subtilis genome.”  Kasahara Y.et.al.   9205843
[2] “The complete genome sequence of the Gram-positive bacterium Bacillus subtilis.”  Kunst F.et.al.   9384377
[3] “The Rok protein of Bacillus subtilis represses genes for cell surface and extracellular functions.”  Albano M.et.al.   15743949
[4] “The yydFGHIJ operon of Bacillus subtilis encodes a peptide that induces the LiaRS two-component system.”  Butcher B.G.et.al.   17921301

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKLEFKKSIS NKVIIILGAM FVFLFLLGYF LLVGIDKVSN VTPEMFFFSS YTVATQFGLM 
61:	LFSFVIAFFI NREYSNKNIL FYKLIGENIY TFFYKKIAVL FLECFAFITL GLLIISLMYH 
121:	DFSHFALLLF LFSAVILQYI LIIGTISVLC PNILISIGVS IVYWMTSVIL VAISNKTFGF 
181:	IAPFEAGNTM YPRIERVLQS DNMTLGSNDV LFIILYLVSI IIINAIVLRF SKTRWIKMGL