TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.2.2.8
V-type ATPase with 13 subunits

Accession Number:Q6BGD8
Protein Name:Chromosome undetermined scaffold_1, whole genome shotgun sequence
Length:793
Molecular Weight:93110.00
Species:Paramecium tetraurelia [5888]
Number of TMSs:6
Substrate H+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MFRSQEMSYF QLVMPQDSAW TIMDQLGYLS KVEIIDHNRN EALINRPFAN YVKRCDDLMV 
61:	KIENMLQVAK NLNLLSNYKK GNLKQFTNQQ NSHTHTYLDK IEEDINKRTS SFQEQNKHLE 
121:	QLIDQSEYIQ NYIEILIESQ RYLGENAFQN QQTSKFEYYV GILKNQEQLQ FHRVIFRVTK 
181:	GNSYVHLKRM NEKQSIFIVL FPNIGNYGKQ KIQKIVEQVS LGKFALPQNL LEFEKKLYEL 
241:	KNKEAEYINL IKMTQNQLCQ CISNMLVIRN GLPLIEYYKF YLIKEKELYK ELNKLKMQGR 
301:	LFLGELWVPT KDIQQLEQTI QVIKEQQSNN PGGQLAQKSP PDFLQKPTYF KLNEFTQVFQ 
361:	EIVNTYGIPR YQEINPAIIT IITFPFLFGV MFGDIGHGFV LFVFGSYLCL FKNKSFYNLR 
421:	YLILLMGVFS FYSGLIYNDY LSLSLNLFQT CLGSEDQCVY PFGIDPMWGD HLEFNDSFKM 
481:	KLSIIIAFCH MLLGVSLSGL NYLFLEDWLR LTCKFIPQLL FLICTIGYMV FLIIYKWLTP 
541:	FEPQNAPSII TTMISMILNL GRISGPQMWE GDSQNYVQYC LLIICIITIP WMWLPSIISH 
601:	LVRRKSHQQS KDKLKTHRVD YGQLIEESGV EMIQTSSYSH EQTDVKQNKE LQDSKVQIQQ 
661:	KEHNSHLGIE DMIVHETIET LEYVLGVISN TASYLRLWAL SLAHSQLSQV FFELLLVQPI 
721:	NHGQPISLMI GYPFWALITF GVLMCMDSME CFLHSLRLHW VEFQNKFFKG DGVQFKAYSF 
781:	RDRIKDSINL ESQ