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3.A.1.122.6
ABC transporter of unknown function (DUF214 protein) (4TMSs)/ABC protein [MA2839/MA2840]

Accession Number:Q8TM31
Protein Name:ABC transporter, permease protein aka MA2839
Length:401
Molecular Weight:43973.00
Species:Methanosarcina acetivorans [2214]
Number of TMSs:5
Location1 / Topology2 / Orientation3: Mitochondrion1
Substrate Unknown

Cross database links:

HEGENOM: HBG546265
RefSeq: NP_617738.1   
Entrez Gene ID: 1474735   
Pfam: PF02687   
BioCyc: MACE188937:MA2839-MONOMER   
KEGG: mac:MA2839   

Gene Ontology

GO:0016020 C:membrane

References (1)

[1] “The genome of Methanosarcina acetivorans reveals extensive metabolic and physiological diversity.”  Galagan J.E.et.al.   11932238

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MLEKAKVSFF LASRSITRGN KGITIFTVFV LTLIFIQLVL FSSILAGVTL KFNELMVDYQ 
61:	TGNVVIEPKE EEHYIEDASA LQKKIESLPQ VVGTSARLKT TGTFRYKEKE IGGTVYGIDP 
121:	ADEAFVTGLE GAVISGEFLS RPDRGEIILG REVSGGYGAL MESRSLGGVE VGDTIELTIS 
181:	GKTKEFRVKG IYSTLFFMAD AGAYISRADM EEMLGVENED YAQEIAVKTT PGTDEYETRT 
241:	ALLSLGIKEN IRTWHEFAGI LRLIENTLGL VRNIMNAIGL LIAFVIIFVV IYVNIVNKKR 
301:	QIGVQKAIGI EQNVIVASFV LQAMLYAGTG IILGYAFMRF GLVPYTVSHP LQVPLGAMSL 
361:	KLDDAEAIDR AILLFLASII GSVIPAYKLA QKDLLDLIWG K