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3.A.1.12.9
The salt-induced glycine betaine OtaABC transporter (Schmidt et al., 2007)

Accession Number:Q8U4S3
Protein Name:OtaC
Length:306
Molecular Weight:34033.00
Species:Methanosarcina mazei [2209]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Glycine betaine

Cross database links:

HEGENOM: HBG696360
RefSeq: NP_632066.1   
Entrez Gene ID: 1478384   
Pfam: PF04069   
BioCyc: MMAZ192952:MM0042-MONOMER   
KEGG: mma:MM_0042   

Gene Ontology

GO:0005488 F:binding
GO:0005215 F:transporter activity
GO:0006810 P:transport

References (2)

[1] “Identification of a salt-induced primary transporter for glycine betaine in the methanogen Methanosarcina mazei Go1.”  Roessler M.et.al.   11976081
[2] “The genome of Methanosarcina mazei: evidence for lateral gene transfer between Bacteria and Archaea.”  Deppenmeier U.et.al.   12125824

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKLNKKKLKS LFIVGLVLGL FIFGAGCADD TQEGTEETAD AAEYNQPVEI GYVLWDGEIA 
61:	STNVIQQVLQ QAGYTDVEII AVDAGPLYQG VASGEFDFTT SAWLPQTQAN YWETYGDRID 
121:	SVRVNLEDCT IGLAVPTYVE EVNSIEDLND NKEMFNGEII GIDPGAGVMQ ITEDVIEAYD 
181:	LDYTLVSSSS AGMTAALQRA INNEEPVVVT LWSPHWAFNR WDLKYLDDPQ GYYGEADNVE 
241:	TLARQGLEED MPNLYGILER FAWTHEDIQS VMVDIESGMA PEEAAAKWVE NNPEKVNEWI 
301:	GEEVEE