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3.D.1.6.3
The higher plant H+ translocating NADH dehydrogenase (NDH) complex (41 subunits; 23 included here) (Cardol et al., 2004)

Accession Number:Q9FNN5
Protein Name:53.5 (NuoF)
Length:486
Molecular Weight:53449.00
Species:Arabidopsis thaliana (Mouse-ear cress) [3702]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Mitochondrion1
Substrate H+

Cross database links:

Genevestigator: Q9FNN5
RefSeq: NP_196470.1   
Entrez Gene ID: 830752   
Pfam: PF01512    PF10589    PF10531   
BioCyc: MetaCyc:AT5G08530-MONOMER   
KEGG: ath:AT5G08530   

Gene Ontology

GO:0005739 C:mitochondrion
GO:0045271 C:respiratory chain complex I
GO:0051539 F:4 iron, 4 sulfur cluster binding
GO:0010181 F:FMN binding
GO:0051287 F:NAD or NADH binding
GO:0008137 F:NADH dehydrogenase (ubiquinone) activity
GO:0055114 P:oxidation reduction

References (1)

[1] “Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.”  Tabata S.et.al.   11130714

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MAPVRGILGL QRAVSIWKES NRLTPALRSF STQAASTSTT PQPPPPPPPP EKTHFGGLKD 
61:	EDRIFTNLYG LHDPFLKGAM KRGDWHRTKD LVLKGTDWIV NEMKKSGLRG RGGAGFPSGL 
121:	KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY 
181:	IRGEYVNERL NLEKARREAY AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE 
241:	GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC 
301:	ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM 
361:	DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE SCGQCTPCRE GTGWLWMIME 
421:	RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE 
481:	LLQAAA