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3.D.1.6.3
The higher plant H+ translocating NADH dehydrogenase (NDH) complex (41 subunits; 23 included here) (Cardol et al., 2004)

Accession Number:Q9SK66
Protein Name:Putative NADH-ubiquinone oxireductase - Arabidopsis thaliana (Mouse-ear cress).
Length:402
Molecular Weight:43936.00
Species:Arabidopsis thaliana (Mouse-ear cress) [3702]
Number of TMSs:2
Location1 / Topology2 / Orientation3: Mitochondrion inner membrane1 / Peripheral membrane protein2 / Matrix side3
Substrate H+

Cross database links:

Genevestigator: Q9SK66
eggNOG: KOG2865
HEGENOM: HBG755066
RefSeq: NP_565469.1   
Entrez Gene ID: 816555   
Pfam: PF01370   
BioCyc: MetaCyc:AT2G20360-MONOMER   
KEGG: ath:AT2G20360   

Gene Ontology

GO:0005739 C:mitochondrion
GO:0045271 C:respiratory chain complex I
GO:0003824 F:catalytic activity
GO:0050662 F:coenzyme binding
GO:0044237 P:cellular metabolic process
GO:0009651 P:response to salt stress

References (1)

[1] “Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.”  Lin X.et.al.   10617197

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MQVVSRRLVQ RPLVGGASIY SSSSLRSLYG VSNHLNGTDN CRYSSSLATK GVGHLARKGT 
61:	GGRSSVSGIV ATVFGATGFL GRYLVQQLAK MGSQVLVPFR GSEDSPRHLK LMGDLGQVVP 
121:	MKFDPRDEDS IKAVMAKANV VINLIGREYE TRNFSFEDAN HHIAEKLALV AKEHGGIMRY 
181:	IQVSCLGASV SSPSRMLRAK AAAEEAVLNA LPEATIMRPA TMIGTEDRIL NPWSMFVKKY 
241:	GFLPLIGGGT TKFQPVYVVD VAAAIVAALK DDGSSMGKTY ELGGPDVFTT HELAEIMYDM 
301:	IREWPRYVKL PFPIAKAMAA PRDFMVNKVP FPLPSPQIFN LDQINALTTD TLVSDNALKF 
361:	QDLDLVPHKL KGYPVEFLIQ YRKGGPNFGS TVSEKIPTDF YP