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1.A.1.10.2
Na+ channel, α-subunit, SCAP1

Accession Number:P90670
Protein Name:SCAP1
Length:1993
Molecular Weight:225898.00
Species:Aplysia californica (California sea hare) [6500]
Number of TMSs:22
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Na+

Cross database links:

Pfam: PF00520    PF06512   

Gene Ontology

GO:0001518 C:voltage-gated sodium channel complex
GO:0005248 F:voltage-gated sodium channel activity
GO:0006814 P:sodium ion transport
GO:0055085 P:transmembrane transport

References (1)

[1] “Cloning and tissue distribution of the Aplysia Na+ channel alpha-subunit cDNA.”  Dyer J.R.et.al.   9115644

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MDHELAEWTP FRLFTRESLF TIDRRIAEEE AAKHAEKAPP ESDDDDEELD EPSHHEENLK 
61:	PNPKLEAGRK LPPSLEDYPR EYVGKPLEDL DEFYHNQKTF VVLKKDKAIF RFSATDAIFL 
121:	LSPFNPIRRI AIYILVHPIF SLLVMMTILV NCVFMAITSY TPPAFVEHIF LGIYTVEAVV 
181:	KVLSRGFVLK PFTYLRDPWN WLDFFVISIA YMTMTVKSFG NLQALRTFRV LRALKTISVI 
241:	PGLKTIVGAL LEAVRRLRDV MILTVFVLSI FALIGMQLYS GALRQKCVLN PVPELGTNIT 
301:	HDEWNDWVNN ESHWQKDFYD EWQVCGNGTG AGKCGNGTIN GTAEWLCLPN IGQNPNHDFT 
361:	SFDNFGMALL CAFRLMTQDF WESLYHLVLR AVGSAHCLYF VLVILLGSFY LVNLILAIVA 
421:	MSYDETQKQD QADAEEEAAE RQEEEARKEA LSIMTKSPSN SSWNNDFEAG VRTAGDKAEE 
481:	KERLSLTSDH SATSAHLKPS RLNQKRHSLS LPGSPYIHRR NSRGSQYSWR KPVPTAKRSP 
541:	YCPDRQPLVH HTLENLPLPF ADDSAAVTPS SEDLCNFSFI RNMPNGRRFS FASQRRPDGT 
601:	GRSGSRRSSF ASNHSRASRT SRGSGQGDRT KTQTLLNFKK GKVPDVVLDK SKLDDDQDSV 
661:	SSGGSGHCPE KDKASESNPF LSHSPGGPNV EMKDVMVLKD ILDQASGHRR SFVSMTSIHQ 
721:	RTMKDIMWKY FCTWDCHPNF QKLQRLVSLF IMDAFVDLFI TICILVNTAF MAMEHYDMED 
781:	DLKAVSNAAN LVFTAIFAVE AFLKILALSP VIYFKDGWNI FDSIIVALSL MELSMTKLPG 
841:	LSVLRAFRLL RVFKLAKSWP TLNMLIAIVG RTMGALGNLI IVLGIIIFIF AVMGQQLFSS 
901:	DYKTYEREID AWGNVTINKD KMPRWNFNDF LHSFMIVFRV LCGEWIESMW GCYLVSGWAC 
961:	VPFFLLTYVV GNLVVLNLFL ALLLSSFGSE SLQRSESDDE PSKIAEAIDR FKRFGNWVKV 
1021:	KIIVCIKVKL QRQKNWRPPP TTGQSEVNGK DPAVVDGTVV SMEKTPDDFP DGPCCPAQAA 
1081:	ICSAKKDLKS PSGSHSNSGS SHCSSCSSLS ESAQTKKIDL EADHEINEVE IVYVKEPDDC 
1141:	FCYMCTKRCP WCVKVEKSKI GRAWWAVRCF FYRLTENKYF DSFIIAMILA SSCALALEDA 
1201:	YLHEKPILKE ILEYLDKVFT AIFIIEMLIK WLAFGFKTYF TDAWCWLDFT IVMLSIVMLV 
1261:	ADLTASEEGG GSMSWMKSMR TLRALRPLRA VSRWEGMRVV VNALFKAIPS ICNVLLVCLV 
1321:	FWLIFGIMGV QLFNGKFHAC RDEKGDKYPR EEVPNKTVCI DKGYNWTNAQ INFDHVLSAY 
1381:	LALFQVATYK GWIDIMNNAI DSTEIGQQPS REENVIMYLF FVLFIVFCSF FTLNLFIGVI 
1441:	IENFNSQKKK AGGSLEMFMT EDQKKYYNAM KRMQSKSPQK SIPRPKYKLA GLIFDITTDQ 
1501:	KFDIAIMVII ILNMLTMMFE HHGMSAQMKN ILGIFNLIFI TIFTAECVLK LIGLRWYYFK 
1561:	IPWNVFDFVV VVLSILASSL SEFEDSFFIS PTLLRVIRVF RVGRVLRLVK SAKGIRTLLF 
1621:	SMAVSLPALF NIGLLLGLIM FIYAIMGMNF FMGAEQKYGL DDAFNFDTFL RSFILLFQMC 
1681:	TSAGWSDVLN GLIARCAPEG TCKDYNVATI YLATYLVVSF LVVVNMYIAV ILENFSQATE 
1741:	DEQQGLTPDD FDMYYEKWEK YDPKASKYIP LDQLSDFVDY LEEPLRLPKP NHFILVKLDI 
1801:	PICENDRCYC RDILDALTKN FLGTGETSDI PQKETDKEKE EYKPISSTLR RQKEHYAARI 
1861:	IQKAYRNFKG ITFGDGTGSS GKDEDTRSSK SDDDNDDDNG GDGRGGGMNG TRGGRRHGAE 
1921:	NGEKTKDRDG SKRDGKDSPS KDSNDDSSQQ AQDKPKETED EEQRLQDSGI VIVNETDADP 
1981:	KTVELGPDSG VVA