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1.A.1.11.30
TPC calcium channel protein with two transmembrane domains of 6 TMSs each (720 aas and 12 TMSs) (Wheeler and Brownlee 2008).

Accession Number:A9RNL0
Protein Name:Predicted protein
Length:770
Molecular Weight:87771.00
Species:Physcomitrella patens subsp. patens (Moss) [3218]
Number of TMSs:12
Substrate Ca2+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MRKKVRKKTP LPEIQEEGLL TPLRRGQSAY LQQTCPDFRR FPDLEYGPQS ESSLTSHVEM 
61:	AAALVDQAMM GRWMPLAVVY HKDYESAKSA FLLYHQLSFV RGLVYFLLMV LPFFEIPAWC 
121:	DGDLPHPCGD SKKYPLSGLP YVRSWTSVTI QVIVLGLMII STLTSSIGLS ELRGINISMY 
181:	IRLLVPVVFS RAIRGCFRMT VRIIHTFMDI AVLVGTFVLL SAWVATALFS DTSVDFKDFS 
241:	TSLLSLFVLL TTANNPVVWA STYNANRLAF FFFFFYMVVG LYFLMNLAFS VIYSSYKAQM 
301:	AVEVAKRITA RQGNLRAAFS LLDTRHQEWI DGATMIALFL AIGRYRHIPD VRARASRLFL 
361:	ALNKRGDFKI WSDEFEELCD VIAKEVERQP DMARLKRRRS NSDMHFVKHP FYNYECGGLP 
421:	TFLPSLHPAN NLTQPNKPRY IHASSNIGYF LHLKLVTRTA WYMLMQVGGA VQMLLINLEF 
481:	LFGNGRSSIS SRVVFRQYDY VILTFGMVMG GWIFVMDGVL KICVQGWKSY WRTRVNRFDF 
541:	VVTLLIVAVQ AASFYNDDAR HWVSYLTIAR CFRILALVTM ISRWRLMGET LVHVIPATAP 
601:	ILALQFLVCS LFALLGMHLF GGLIYKDNPA LVGTEYAQHQ FYAFNFNDYP SAMATCFNLC 
661:	VVNKWYVFMD AYAAVTGTRW SRTYFIAFWA IAVAFTLNVV VAFFAEAFTS QMEKAEKLKA 
721:	RDKRSAEQDL LPRGGALLRK KSGGGAGALP RRAAKSLSYY DLYEDIVQKT