TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.1.29.6
Putative cation transporting channel-2 of 288 aas with 2 N-terminal TMSs (Hug et al. 2016).

Accession Number:ALM14528
Protein Name:ALM14528.1 Ion transport 2 domain protein [Candidatus Peribacter riflensis]
Length:289
Molecular Weight:
Species:Candidatus Peribacter riflensis [1735162]
Number of TMSs:2
Substrate cation

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MEMQHGSPNN GRPRLHQRLA EKIITLPYTA LFSLWFVLAA LFAAAYALLA VFAPEHAPQA 
61:	LLDQGPLRLI GNSLYYSVIT STTTGYGDIV PMGFSKFLSC IQSVVGFFLL AVFVTKLVSQ 
121:	QQELAVRQMH KLTYEDVFHN TREGLFVIRN DFDRLIQKVE QREPLTLEDW DDLAIAFKQG 
181:	QSLLLEIPEF YSPEEVGLYT IDERREQLLQ EAVHRTLHRI NQLIDGFGLA GIDWTAHQKS 
241:	AQELKEFLSV VGRVAPLWHA RSPYAKNESF EMILRLKERA MNRMKHAA