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1.A.62.3.2
UPF0126 of 7 TMSs. Adjacent to genes encoding a putative oligopeptide ABC uptake permease that controls sporulation and actinorhodin production (TC#3.A.1.5.34) (Shin et al. 2007).

Accession Number:Q9RKM3
Protein Name:UPF0126 membrane protein SCO4104
Length:218
Molecular Weight:22064.00
Species:Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) [100226]
Number of TMSs:7
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Oligopeptides

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSTEPAPLLA LDLTGTFAFG LNGALTAVRA ARLDVVGVVV LGMITALGGG VIRDVLIDSL 
61:	PPAAFLDWRY YTLAAAGGLL AFAVSRHLRR LEPAITVLDA VGLSTFAVIG ASKALDAGLA 
121:	VVPAMLLGVI TAVGGGTIRD TLVGRIPTVL RTGLYAIPAL AGAAVTVATT ETGVYGLPAA 
181:	LGAAAVCFLI RMLGLHFGIN APEPPETRPS GGGTRRQK