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1.A.83.1.1
Viroporin VP2

Accession Number:P03093
Protein Name:Minor capsid protein VP2
Length:352
Molecular Weight:38539.00
Species:Simian virus 40 (SV40) [10633]
Number of TMSs:2
Location1 / Topology2 / Orientation3: Host nucleus1
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MGAALTLLGD LIATVSEAAA ATGFSVAEIA AGEAAAAIEV QLASVATVEG LTTSEAIAAI 
61:	GLIPQAYAVI SGAPAAIAGF AALLQTVTGV SAVAQVGYRF FSDWDHKVST VGLYQQPGMA 
121:	VDLYRPDDYY DILFPGVQTF VHSVQYLDPR HWGPTLFNAI SQAFWRVIQN DIPRLTSQEL 
181:	ERRTQRYLRD SLARFLEETT WTVINAPVNW YNSLQDYYST LSPIRPTMVR QVANREGLQI 
241:	SFGHTYDNID EADSIQQVTE RWEAQSQSPN VQSGEFIEKF EAPGGANQRT APQWMLPLLL 
301:	GLYGSVTSAL KAYEDGPNKK KRKLSRGSSQ KTKGTSASAK ARHKRRNRSS RS