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1.A.85.1.2
2B protein (99 aas) derived from the polyprotein of human coxsackie virus (Patargias et al., 2009).

Accession Number:Q5MP79
Protein Name:Capsid protein
Length:99
Molecular Weight:11466.00
Species:Human coxsackievirus B1 [12071]
Substrate small molecules

Cross database links:

Pfam: PF00073   

Gene Ontology

GO:0019028 C:viral capsid
GO:0005198 F:structural molecule activity

References (2)

[1] “Nucleotide analysis and phylogenetic study of the homology boundaries of coxsackie A and B viruses.”  Bolanaki E.et.al.   16175336
[2] “Evolution of 2B and 2C genomic parts of species B Coxsackie viruses. Phylogenetic study and comparison with other regions.”  Bolanaki E.et.al.   16732477

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	QTRHVKNYHS RSESSIENFL CRSACVYYAT YTNNTKKGYA EWVVNTRQVA QLRRKLELFT 
61:	YLRFDLELTF VITSAQQPST ATSVDAPVQT HQIMYVPPG