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1.A.85.1.7
Human rhinovirus 1A 2B protein of 2157 aas

Accession Number:P23008
Protein Name:Genome polyprotein
Length:2157
Molecular Weight:242487.00
Species:Human rhinovirus 1A (HRV-1A) [12134]
Location1 / Topology2 / Orientation3: Host cytoplasmic vesicle membrane1 / Peripheral membrane protein2 / Cytoplasmic side3
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MGAQVSRQNV GTHSTQNSVS NGSSLNYFNI NYFKDAASSG ASRLDFSQDP SKFTDPVKDV 
61:	LEKGIPTLQS PSVEACGYSD RIMQITRGDS TITSQDVANA VVGYGVWPHY LTPQDATAID 
121:	KPTQPDTSSN RFYTLESKHW NGSSKGWWWK LPDALKDMGI FGENMYYHFL GRSGYTVHVQ 
181:	CNASKFHQGT LLVAMIPEHQ LASAKHGSVT AGYKLTHPGE AGRDVSQERD ASLRQPSDDS 
241:	WLNFDGTLLG NLLIFPHQFI NLRSNNSATL IVPYVNAVPM DSMLRHNNWS LVIIPISPLR 
301:	SETTSSNIVP ITVSISPMCA EFSGARAKNI KQGLPVYITP GSGQFMTTDD MQSPCALPWY 
361:	HPTKEISIPG EVKNLIEMCQ VDTLIPVNNV GNNVGNVSMY TVQLGNQTGM AQKVFSIKVD 
421:	ITSQPLATTL IGEIASYYTH WTGSLRFSFM FCGTANTTLK LLLAYTPPGI DEPTTRKDAM 
481:	LGTHVVWDVG LQSTISLVVP WVSASHFRLT ADNKYSMAGY ITCWYQTNLV VPPSTPQTAD 
541:	MLCFVSACKD FCLRMARDTD LHIQSGPIEQ NPVENYIDEV LNEVLVVPNI KESHHTTSNS 
601:	APLLDAAETG HTSNVQPEDA IETRYVITSQ TRDEMSIESF LGRSGCVHIS RIKVDYTDYN 
661:	GQDINFTKWK ITLQEMAQIR RKFELFTYVR FDSEITLVPC IAGRGDDIGH IVMQYMYVPP 
721:	GAPIPSKRND FSWQSGTNMS IFWQHGQPFP RFSLPFLSIA SAYYMFYDGY DGDNTSSKYG 
781:	SVVTNDMGTI CSRIVTEKQK HSVVITTHIY HKAKHTKAWC PRPPRAVPYT HSHVTNYMPE 
841:	TGDVTTAIVR RNTITTAGPS DLYVHVGNLI YRNLHLFNSE MHDSILISYS SDLIIYRTNT 
901:	IGDDYIPNCN CTEATYYCRH KNRYYPIKVT PHDWYEIQES EYYPKHIQYN LLIGEGPCEP 
961:	GDCGGKLLCR HGVIGIITAG GEGHVAFIDL RQFHCAEEQG ITDYIHMLGE AFGNGFVDSV 
1021:	KEQINAINPI NNISKKVIKW LLRIISAMVI IIRNSSDPQT IIATLTLIGC NGSPWRFLKE 
1081:	KFCKWTQLTY IHKESDSWLK KFTEMCNAAR GLEWIGNKIS KFIDWMKSML PQAQLKVKYL 
1141:	NEIKKLSLLE KQIENLRAAD SATQEKIKCE IDTLHDLSCK FLPLYAHEAK RIKVLYNKCS 
1201:	NIIKQRKRSE PVAVMIHGPP GTGKSITTNF LARMITNESD VYSLPPDPKY FDGYDNQSVV 
1261:	IMDDIMQNPD GEDMTLFCQM VSSVTFIPPM ADLPDKGKPF DSRFILCSTN HSLLAPPTIS 
1321:	SLPAMNRRFF FDLDIVVHDN YKDTQGKLDV SKAFRPCNVN TKIGNAKCCP FVCGKAVXFK 
1381:	DRSTCSTYTL AQVYNHILEE DKRRRQVVDV MSAIFQGPIS LDXPPPPAIX DLLQSVRTPE 
1441:	VIKYCQDNKW VIPAECQVER DLNIANSIIA IIANIISIAG IIFVIYKLFC SLQGPYSGEP 
1501:	KPKTKVPERR VVAQGPEEEF GRSILKNNTC VITTGNGKFT GLGIHDRILI IPTHADPGRE 
1561:	VQVNGVHTKV LDSYDLYNRD GVKLEITVIQ LDRNEKFRDI RKYIPETEDD YPECNLALSA 
1621:	NQDEPTIIKV GDVVSYGNIL LSGNQTARML KYNYPTKSGY CGGVLYKIGQ ILGIHVGGNG 
1681:	RDGFSAMLLR SYFTDTQGQI KVNKHATECG LPTIHTPSKT KLQPSVFYDV FPGSKEPAVL 
1741:	TDNDPRLEVN FKEALFSKYK GNVECNLNEH MEIAIAHYSA QLMTLDIDSR PIALEDSVFG 
1801:	IEGLEALDLN TSAGFPYVTM GIKKRDLINN KTKDISRLKE ALDKYGVDLP MITFLKDELR 
1861:	KKEKISTGKT RVIEASSIND TILFRTTFGN LFSKFHLNPG VVTGSAVGCD PETFWSKIPV 
1921:	MLDGDCIMAF DYTNYDGSIH PVWFQALKKV LENLSFQSNL IDRLCYSKHL FKSTYYEVAG 
1981:	GVPSGCSGTS IFNTMINNII IRTLVLDAYK NIDLDKLKII AYGDDVIFSY KYTLDMEAIA 
2041:	NEGKKYGLTI TPADKSNEFK KLDYSNVTFL KRGFKQDERH TFLIHPTFPV EEIHESIRWT 
2101:	KKPSQMQEHV LSLCHLMWHN GRKVYEDFSS KIRSVSAGRA LYIPPYDLLK HEWYEKF