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1.A.9.10.1
Cyc-loop anion ligand-gated receptor of 453 aas and 6 TMSs, LIC1 (Mukherjee 2015).

Accession Number:A8IPQ3
Protein Name:Ligand-gated ion-channel
Length:453
Molecular Weight:50206.00
Species:Chlamydomonas reinhardtii [3055]
Number of TMSs:6
Substrate ions

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MGADSSTYSA MWWLVLTWRD PAAGAAVTQR TAQVLTGSDS CNKTCDYSGL ATAGCCDTIW 
61:	LPHIELLNIV TYDDSQLPRY RINANATSGT VTWSTRLVGT WYAPFDFRAY PFEHQHLLLE 
121:	ISIASYQALA AGLVWEHVAK LNNTAHTKGA DLAGWYVNWG KGKVYDTRSC QKEVGTAEPR 
181:	WGDRYLPPNP GRGTTSPDWC GTYAPHLYDE ARALYGPVVL VADIMIKRVS SYYVLTNLIP 
241:	VLLITLVAFV VFFMPQDALG DRMSVVLTMF LSLTAMQFVF DFPPANYINA LQIVVLVSYV 
301:	MISIACIESL IVNRIATVNR VVSNKRTCMR KYGNMLANAG GSAAGKGGLV SWWRRCAGAC 
361:	CGPRGRLLAS LRAFGAAMVA WLVGVTRAPR QFYQQCKEDR AFAEFIAARI DKWACICCAV 
421:	AYIVVISVML WFEVETLWLQ SNAEKHGLPA FRL