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1.A.9.10.2
Uncharacterized ligand-gated ion channel of 539 aas and 4 TMSs.

Accession Number:E1ZET6
Protein Name:Putative uncharacterized protein
Length:539
Molecular Weight:58350.00
Species:Chlorella variabilis (Green alga) [554065]
Number of TMSs:4
Substrate ions

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MGRAPATLAL CCAAVYLLLA AGGAAAQQLT PFQGRNAPPE GGVDVYVSAI VDHLIEVDDS 
61:	KYKFQAVMYM LLTWQDERAA AAVNASTKAA QSADYNNGDG CAYPCTTIYA WDRNPNAINL 
121:	CCDLVFLPHF EFINVVGFSQ DRVVRYGVRL GENNSVAWWQ HIQGEFYTPM SFRAFPFDKQ 
181:	YLNIQIQYGN KYPEDPVNII PSASGTQLYT PATGDELSGW TVTGLSMRTY DLETQNLVRS 
241:	GGSSYSAPGD PYPINPSDPN QEAFEGFLWQ HGIDIFIEVE RISLYYVITA IMPIYINTCL 
301:	SLLVFSVNPR HLDTRLGIVV TLFLSLTALQ FVLAVGLPSS ATVVPTQQLI IVAYCILAGI 
361:	GVFSILTFWM VQLHRSSERQ RRLKLAKRQF TRRWASVSQS LGIAAAAVAA MQQREASGNG 
421:	SSAGLRRRKS RQQQQEQQQQ QEEHEEEVEV RLPSALRVSF AAAASAHVAA TGEQPAGAAP 
481:	SAIHVSPFAS GQPVAVEAVG APQLAWACMR LAAAAAAAAR TVTRAATAPL PAAAHAAAA