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1.A.9.4.7
Ligand-gated ion channel, Lgc-34 of 390 aas and 4 TMSs. IGDB-2, an Ig/FNIII protein, binds LGC-34 to control sensory compartment morphogenesis (Wang et al. 2017).

Accession Number:O17274
Protein Name:Ligand-Gated ion Channel
Length:390
Molecular Weight:44522.00
Species:Caenorhabditis elegans [6239]
Number of TMSs:4
Substrate

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  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MRNIFLFLVL LSIGVCSAQK AFHSRRLGTE GQIVGRILSE YDSSSRPPVR DHADNSAILV 
61:	ITNIFINRLI WHNNYAEVDL YLRQQWQDSR LKYDVDTREG IDEIRLPGNR KIWEPDTYFT 
121:	SGKELSRNEK NSKHIVVEPS GYIRSSERVL LELPYAYGTM FPFTNSRQFT IKLGSYNYDI 
181:	DDIVYLWANS PPLVNPIEVS QDLLKGDLTF EEASAGDCVG NYTVGVYSCI DAHVYFSAST 
241:	ISGLMSWFLP SLFLLIGSWL HFWIHGSWSV PRTISAAVPF FILAAYYIFM REDSYTQAQG 
301:	AWLAFCLVLT FFSFVEYFLV ICCGGRRSIR YKTLGPQEDH PMGAAKETVE VAYNEGCASF 
361:	RDNNGIDVIS RVAFPIVTIV FLIIYFIFIV