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1.A.9.6.2
The high affinity dopamine receptor chloride channel, Lgc-53 (Ringstad et al., 2009).

Accession Number:Q2PJ95
Protein Name:Putative uncharacterized protein
Length:278
Molecular Weight:32430.00
Species:Caenorhabditis elegans [6239]
Number of TMSs:4
Location1 / Topology2 / Orientation3: Mitochondrion inner membrane1 / Single-pass membrane protein2
Substrate Cl-

Cross database links:

eggNOG: KOG3644
RefSeq: NP_741946.2   
Entrez Gene ID: 188702   
Pfam: PF02931    PF02932   

Gene Ontology

GO:0030054 C:cell junction
GO:0016021 C:integral to membrane
GO:0045211 C:postsynaptic membrane
GO:0005230 F:extracellular ligand-gated ion channel acti...
GO:0006811 P:ion transport

References (1)

[1] “Genome sequence of the nematode C. elegans: a platform for investigating biology.”  The C. elegans sequencing consortiumet.al.   9851916

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MDRQSCNLVF ESYSYNTAEV RIVWRDWDAV TIPDPDSKNL PDFELVNIEH MNATLVYTAG 
61:	LWDQLEVKFT FRRLYGYYVL QAYMPTYLSV FISWIAFWID TKALPARITL GVSSLMALTF 
121:	QFGNIVKNLP RVSYVKALDI WMFGCVGFIF LSLVELAVVG FADKLEAKRR RHNRCKEQLM 
181:	MRSDSEQQWL SRLSGQRPQV SETNSDATHT IQINDGNGNV RRRKSEEKRQ KLLLQMESPM 
241:	FVNGEKIDEI SAKLFPLLFT AFNIFYWFYY IGMSGGFF