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1.A.9.8.2
Uncharacterized ligand-gated ion channel of 343 aas and 4 TMSs.

Accession Number:U7QEN5
Protein Name:Neurotransmitter-gated ion-channel ligand binding domain protein
Length:343
Molecular Weight:38984.00
Species:Lyngbya aestuarii BL J [1348334]
Number of TMSs:4
Substrate ions

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MQLKNLVAAL PKTSTVAANI TIEDDINPAR ELLVRERPFS EQGATEISVG LYVIDLFKID 
61:	EARQSFEADF FIEFRWKDPH LVMSQSHCSI ASCRKTLDEI WHPAARIFNQ RNLTKNFETT 
121:	VVAPDGTVVC GQRFNGLVSS PLNLKRFPFD EQTLKIQIMS FVFSPDEVQF LVNHHLTGLA 
181:	EEISLPNWST NTPIAHTGSR HIAQLNQSFV CFDYELQVKR YTAYYITRVI LPLILIVLMS 
241:	YAVFWFPPGQ IMPQVTISVT AILSLITYEF TLQQSLPQVP YLTVLDKFVI GAMVMVFLAL 
301:	VETVTTIELA EVKLQFLALD LDSWLRWLFP AFLTGLAAAA FWL