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1.B.1.1.25
Anion-selective, voltage-sensitive porin, VCA_1008, of 331 aas with a pore exclusion limit of 6.9 nm (Goulart et al. 2015).

Accession Number:Q9KKU2
Protein Name:Outer membrane protein, putative
Length:331
Molecular Weight:35914.00
Species:Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) [243277]
Number of TMSs:1
Substrate anions

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKKAAIAVAV LSAVVSGSTL AATVYDAEGT SLKVGGRLEF RGDFNGNDKG EEIEGTMLNK 
61:	SRVRLNVAGE TDIGAGMKGF GFWEAEQGVK SSAGTSTEQE TTFKQRYMYV GMKGDFGSLS 
121:	FGRQNTAGVQ ISDMSDIGTF TGDQKAFVSA GNEQINNTIA YGYDFESFKL KASYIADDQK 
181:	NADGYGLSGI YSAPFGLDIG LGYAANDLGT DKGSADQIIA GLGYTMGDLY FGATYTTGDK 
241:	DDKADTEFTG IEVSAQYKIT KEFRLIAAYQ NQEEETKNVT KDKADFFELT GRYDFTKNFR 
301:	SYLAYKANGL DDKDAGYKVE DTIRLGLRYD F