TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.1.1.27
Outer membrane porin, OmpS1 of 394 aas.  mutants defective for OmpS1 are attenuated for virulence in mice (Rodríguez-Morales et al. 2006).

Accession Number:Q56110
Protein Name:Outer membrane protein S1
Length:394
Molecular Weight:43253.00
Species:Salmonella typhi [90370]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell outer membrane1 / Multi-pass membrane protein2
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MNRKVLALLV PALLVAGAAN AAEIYNKNGN KLDLYGKVDG LRYFSDNAGD DGDQSYARIG 
61:	FKGETQINDM LTGYGQWEYN IKVNTTEGEG ANSWTRLGFA GLKFGEYGSF DYGRNYGVIY 
121:	DIEAWTDALP EFGGDTYTQT DVYMLGRTNG VATYRNTDFF GLVEGLNFAL QYQGNNENGG 
181:	AGAGEGTGNG GNRKLARENG DGFGMSTSYD FDFGLSLGAA YSSSDRSDNQ VARGYGDGMN 
241:	ERNNYAGGET AEAWTIGAKY DAYNVYLAAM YAETRNMTYY GGGNGEGNGS IANKTQNFEV 
301:	VAQYQFDFGL RPSIAYLQSK GKDLGGQEVH RGNWRYTDKD LVKYVDVGMT YYFNKNMSTY 
361:	VDYKINLLDE DDDFYANNGI ATDDIVGVGL VYQF