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1.B.1.1.6
Major outer membrane porin, OpnP.  Probably orthologous to the E. coli OmpF.  Expression of the opnP gene is activated by EnvZ and regulated by temperatur (Forst et al. 1995; Forst and Tabatabai 1997Forst and Tabatabai 1997).

Accession Number:Q56828
Protein Name:OMPF aka OpnP
Length:369
Molecular Weight:40851.00
Species:Xenorhabdus nematophilus [628]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell outer membrane1 / Multi-pass membrane protein2
Substrate small molecules

Cross database links:

Pfam: PF00267   

Gene Ontology

GO:0009279 C:cell outer membrane
GO:0005886 C:plasma membrane
GO:0046930 C:pore complex
GO:0005215 F:transporter activity
GO:0006811 P:ion transport

References (1)

[1] “Functional and regulatory analysis of the OmpF-like porin, OpnP, of the symbiotic bacterium Xenorhabdus nematophilus.”  Forst S.et.al.   8817498

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKRNILAVVI PALLVAGTAN AAEIFNKDGN KLDLYGKVDV RHQFADKRSS EDGDDSYARI 
61:	GIKGETQISD QLTGFGRWEY NVKAKGTEAA VAESSTRLAF AGLKFANYGS LDYGRNYRVN 
121:	YDVNAWTDVL PIFGGDPMAQ TDNFMTGRST GLLTYRNTDF FGLVDGLNFR LQYQGQNSDR 
181:	TKNKGRDTER SNGDGYGLSS TYDVGYGITV GGSYANSART ADQKEKVSDA YGKRAEAWNI 
241:	GAKYDANNVY LAAMYGETRN MTRYTRTIAD TDATLIANKT QNIELTAQYL FSDLGLKPSL 
301:	AYVQSKGKDL TEGKGFNGDL VKYVSVGTYY YFNKNLSTYV DYKINLLKKD NELGVNARNV 
361:	FGVGLTYQF