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1.B.11.3.1
Type γ fimbrial usher, FimC

Accession Number:P33410
Protein Name:FimC aka FHAA
Length:873
Molecular Weight:93369.00
Species:Bordetella pertussis [520]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell outer membrane1 / Multi-pass membrane protein2
Substrate Fimbrial subunits

Cross database links:

HEGENOM: HBG511492
RefSeq: NP_880573.1   
Entrez Gene ID: 2667065   
Pfam: PF00577   
BioCyc: BPER257313:BP1882-MONOMER   
KEGG: bpe:BP1882   

Gene Ontology

GO:0009279 C:cell outer membrane
GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005215 F:transporter activity
GO:0006810 P:transport

References (3)

[1] “Characterization of a Bordetella pertussis fimbrial gene cluster which is located directly downstream of the filamentous haemagglutinin gene.”  Willems R.J.L.et.al.   1360139
[2] “Common accessory genes for the Bordetella pertussis filamentous hemagglutinin and fimbriae share sequence similarities with the papC and papD gene families.”  Locht C.et.al.   1354611
[3] “Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.”  Parkhill J.et.al.   12910271

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKQIPLILAM SLAFAAAAKG ESAPDMQAAV NFDSAMLWGG ANGADLSRFN YSNALRPGNY 
61:	IVDIYANNYP LIRQQVRFVA AQTSGQGLKT APAVACFTYG QLEAMQVRLR ALDPALVADL 
121:	KSSGRCEVLG KLFPDSRESF DFGENRLEVS IPQAYTINRF RRDISPDEWD SGITAFRLGY 
181:	QYNYADYIGG LRAGRRLDLN LYSGFNFKGW YLRNSSTLGW GQGRFTRRSQ RTSLQTDIPS 
241:	WRARLVFGDV FSSGEYFAPY SMRGMLVGSD TAMLPYSERL YRPTIRGVAR TRANVKVYQA 
301:	GVLVFQDAVP PGPFAIDDYS PASYGGDLRV VVTEANGAVQ TFTVPYASAV RLILPGQTQW 
361:	SFSAGRYRNY RNDGQDRPWV TQLTGRHGVA DGVNLYGGLL IAQAYQAGLA GLSWNTPWGA 
421:	MAADATLSRS QLSTTGNANG SSLRFSYSKT LSGTNTAIRL ATLRYSSSGF WNFADAVNAG 
481:	PVETNGRNGR FGLYSLLGRE RPRGDFSVTL SQPLGGYGSL YVSALRRTYW GSSRVDQQTQ 
541:	LGYSTQVGRV GVNLDVSRTE NRRSTEHQVM LNLSIPLYGA TSSGVVTGSL ARTGSAPVQQ 
601:	SVNYSGMSGE RDQYTYGLGV QRAGTSAQYA LNGSWSGTYG EVSGQLTHGR SYSQYQINGS 
661:	GGLVAHAGGV TFGQYQAGTI GLIQAEAAAG AKVVNTRNAA VDRSGYGLVS LTPYSLNEVE 
721:	LSPQDLPLDV QLESTVEQVI PRAGAVVALR FPTRHDVAAM LVAEPGSEGA LVFGTEVRDG 
781:	AGKVVGVAGQ GASALVRGVS ASGTLEVTRA DGSICRATYD LKSAGQAVHG LPRIALACAP 
841:	QGGGERGARA AGQAVAQPSA ISISGKDHEP DIR