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1.B.11.3.10
Outer membrane usher protein FasD

Accession Number:P46000
Protein Name:Outer membrane usher protein fasD
Length:835
Molecular Weight:92354.00
Species:Escherichia coli [562]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell outer membrane1 / Multi-pass membrane protein2
Substrate Fimbrial subunits

Cross database links:

Pfam: PF13953    PF13954    PF00577   

Gene Ontology

GO:0009279 C:cell outer membrane
GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005215 F:transporter activity

References (1)

[1] “Permissive linker insertion sites in the outer membrane protein of 987P fimbriae of Escherichia coli.”  Schifferli D.M.et.al.   7906265

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MNKYPPLLTM LIIGIGSNAV AGDYFDPSLL ATDIGNNDKL DLSLFSHPGG GVKGEREVSV 
61:	YINDFFYKNV TLDFENGISG ALEPIFPSGF FDNILASPYR SIKEKELIST ADFLSLVPYG 
121:	MVRFDQAIAR VDISIPQAYL GRDAQMKSAP ESWNQGVPAL LIDYRLSGSK NKYNYGSSQN 
181:	FYANAFLGFN LMGWRLRTTT NYMSYNSKDL YNKGERQGSF NFYNTYLEKD IGYLRSTLRL 
241:	GELSTRGMIL ESFNFKGGKI YSNDEMLNDR LRSYTPTVRG IASSQAVVTI KQGGVVILQK 
301:	NVPPGPFEIN DFSLSGYSGD LYVNIKEADG SEHSFIQPFS TLPEMKREGV SGYEISLGHY 
361:	NNSGATQYYN ESPFLYASWS RGYRNGMTLY SETIQSRKYQ LLGVGSTLSL GDFGAVSGDA 
421:	SLSRANKYDK IHSGQSYGLK YSKNKVDTGT TVTLATYRYS TKDFYSFNDF VSKNDSVQYV 
481:	WDNRLKNRIT LSLNQSLDDY GSLSLIASQQ NYWTSDYVSR SFSLSHSFGW NDIFFSTSFS 
541:	LDQKEGDNAL RNNNKVFGFY SSIPLSKLIG KNESTYSTLS YNVTKINNQV RNTATLAGKV 
601:	PGSMAQYRFS SGWANTEQSS NKALSVNWDG DLLDGSLGYT SSGKNRITDY SLSGSAILYP 
661:	WRLAIGSDSV INGAAVVETE FISGIKVRQG GETSLLGTAI VTSMQPYTEN RIDLDTQNIP 
721:	DDLFISNASK KIVPEKGAVV PVKYNLFKGK QIVFSLKRYD GTPLPFGSVV SLVGSDSEIT 
781:	GIIDDAGRVY LAGIPSKGIL HGAWGYNKSC EVSFNLNGKP SNNSNEIIEY EGVCK