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1.B.11.6.1
Type σ fimbrial usher, CsuD

Accession Number:Q6XBY3
Protein Name:CsuD
Length:832
Molecular Weight:92670.00
Species:Acinetobacter baumannii [470]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell outer membrane1 / Multi-pass membrane protein2
Substrate Fimbrial subunits

Cross database links:

Pfam: PF00577   

Gene Ontology

GO:0009279 C:cell outer membrane
GO:0016021 C:integral to membrane
GO:0009289 C:pilus
GO:0005215 F:transporter activity
GO:0006810 P:transport

References (1)

[1] “Attachment to and biofilm formation on abiotic surfaces by Acinetobacter baumannii: involvement of a novel chaperone-usher pili assembly system.”  Tomaras A.P.et.al.   14663080

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MILRHNNLCK SILLILLSGG CLNIPNTVFA GDLPPPPRDI NEINQLFKLY LDLVVNQYSV 
61:	QQVVPVIVKN DEYFIQKKKL IDELEINIPQ ELLTNTDTSL SNQDVLTLGF SGDASDWISL 
121:	DKLKDVSYEY QSSNQYFKLN FPPAWMPTQV LGKDSWYKPE VAQSGIGLLN NYDFYTYRPY 
181:	QGGSTSSLFT EQRFFSPLGV IKNSGVYVKN QYKNEGNAES VDNDGYRRYD TSWQFDNQKN 
241:	ATSFLLGDII TGSKTTWGSS VRLGGFQVQR NYSTRPDLIT YPLPQFIGQA ALPSTVDLII 
301:	NGQKTSSTEV QSGPFILNNV PFINGKGEAV VVTTDAVGRQ VTTSVPFYIS NTLLKPGLFD 
361:	YSLSLGKIRE DYGLKNFSYG KFASAADARY GVNDWLTVEG RTELSSDLQL LGAGSVLKLA 
421:	NLGVLSASFT QSKADKSMSE DRTKDLEGNQ YTVGYSYNRN RFGFSINHNQ RDDEYTDLSR 
481:	LQYSNLISVN SNKSLTANTY FATKNSGTFG VGYINTKAND FKNRFLNLSW APVLPTYMNG 
541:	VTVSLSANRD FIEKEWSAAF QLSIPLFQRN ATVNSGYAFN KQGDTGYVNF NRSVPSEGGF 
601:	GVDLTRRFNE NSEDLNQARV NYRNSYINTD FGLSGNHDYN YWFGLSGSLI YMAGDLFASN 
661:	RLGESFALID TNQVPDVLVR YENSLIGRSN KKGHIFVPSV TPYYSGKYSV DPIDLPSNFT 
721:	ITQVEQRIAA KRGSGVVIKF PVHQSISANV YLTQADGKPV PVGAVVHRAD QESSYVGMDG 
781:	IVYLENLKPN NTVTVQRSDQ SICKADFSVD VEQAKQQIVV VKPVTCHEVS LP