TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.12.1.7
Autotransporter PmpA of 975 aas (Vasilevsky et al. 2016).

Accession Number:O84417
Protein Name:Probable outer membrane protein PmpA
Length:975
Molecular Weight:105649.00
Species:Chlamydia trachomatis (strain D/UW-3/Cx) [272561]
Location1 / Topology2 / Orientation3: Secreted1
Substrate Protein virulence factor

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MNRVIEIHAH YDQRQLSQSP NTNFLVHHPY LTLIPKFLLG ALIVYAPYSF AEMELAISGH 
61:	KQGKDRDTFT MISSCPEGTN YIINRKLILS DFSLLNKVSS GGAFRNLAGK ISFLGKNSSA 
121:	SIHFKHININ GFGAGVFSES SIEFTDLRKL VAFGSESTGG IFTAKEDISF KNNHHIAFRN 
181:	NITKGNGGVI QLQGDMKGSV SFVDQRGAII FTNNQAVTSS SMKHSGRGGA ISGDFAGSRI 
241:	LFLNNQQITF EGNSAVHGGA IYNKNGLVEF LGNAGPLAFK ENTTIANGGA IYTSNFKANQ 
301:	QTSPILFSQN HANKKGGAIY AQYVNLEQNQ DTIRFEKNTA KEGGGAITSS QCSITAHNTI 
361:	IFSDNAAGDL GGGAILLEGK KPSLTLIAHS GNIAFSGNTM LHITKKASLD RHNSILIKEA 
421:	PYKIQLAANK NHSIHFFDPV MALSASSSPI QINAPEYETP FFSPKGMIVF SGANLLDDAR 
481:	EDVANRTSIF NQPVHLYNGT LSIENGAHLI VQSFKQTGGR ISLSPGSSLA LYTMNSFFHG 
541:	NISSKEPLEI NGLSFGVDIS PSNLQAEIRA GNAPLRLSGS PSIHDPEGLF YENRDTAASP 
601:	YQMEILLTSD KIVDISKFTT DSLVTNKQSG FQGAWHFSWQ PNTINNTKQK ILRASWLPTG 
661:	EYVLESNRVG RAVPNSLWST FLLLQTASHN LGDHLCNNRS LIPTSYFGVL IGGTGAEMST 
721:	HSSEEESFIS RLGATGTSII RLTPSLTLSG GGSHMFGDSF VADLPEHITS EGIVQNVGLT 
781:	HVWGPLTVNS TLCAALDHNA MVRICSKKDH TYGKWDTFGM RGTLGASYTF LEYDQTMRVF 
841:	SFANIEATNI LQRAFTETGY NPRSFSKTKL LNIAIPIGIG YEFCLGNSSF ALLGKGSIGY 
901:	SRDIKRENPS TLAHLAMNDF AWTTNGCSVP TSAHTLANQL ILRYKACSLY ITAYTINREG 
961:	KNLSNSLSCG GYVGF