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1.B.12.1.8
PmpB of 1754 aas (Vasilevsky et al. 2016)

Accession Number:O84418
Protein Name:Probable outer membrane protein PmpB
Length:1754
Molecular Weight:183318.00
Species:Chlamydia trachomatis (strain D/UW-3/Cx) [272561]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Secreted1
Substrate Protein virulence factor

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSSMKWLSAT AVFAAVLPSV SGFCFPEPKE LNFSRVGTSS STTFTETVGE AGAEYIVSGN 
61:	ASFTKFTNIP TTDTTTPTNS NSSSSNGETA SVSEDSDSTT TTPDPKGGGA FYNAHSGVLS 
121:	FMTRSGTEGS LTLSEIKITG EGGAIFSQGE LLFTDLTGLT IQNNLSQLSG GAIFGESTIS 
181:	LSGITKATFS SNSAEVPAPV KKPTEPKAQT ASETSGSSSS SGNDSVSSPS SSRAEPAAAN 
241:	LQSHFICATA TPAAQTDTET STPSHKPGSG GAIYAKGDLT IADSQEVLFS INKATKDGGA 
301:	IFAEKDVSFE NITSLKVQTN GAEEKGGAIY AKGDLSIQSS KQSLFNSNYS KQGGGALYVE 
361:	GDINFQDLEE IRIKYNKAGT FETKKITLPK AQASAGNADA WASSSPQSGS GATTVSNSGD 
421:	SSSGSDSDTS ETVPATAKGG GLYTDKNLSI TNITGIIEIA NNKATDVGGG AYVKGTLTCE 
481:	NSHRLQFLKN SSDKQGGGIY GEDNITLSNL TGKTLFQENT AKEEGGGLFI KGTDKALTMT 
541:	GLDSFCLINN TSEKHGGGAF VTKEISQTYT SDVETIPGIT PVHGETVITG NKSTGGNGGG 
601:	VCTKRLALSN LQSISISGNS AAENGGGAHT CPDSFPTADT AEQPAAASAA TSTPESAPVV 
661:	STALSTPSSS TVSSLTLLAA SSQASPATSN KETQDPNADT DLLIDYVVDT TISKNTAKKG 
721:	GGIYAKKAKM SRIDQLNISE NSATEIGGGI CCKESLELDA LVSLSVTENL VGKEGGGLHA 
781:	KTVNISNLKS GFSFSNNKAN SSSTGVATTA SAPAAAAASL QAAAAAVPSS PATPTYSGVV 
841:	GGAIYGEKVT FSQCSGTCQF SGNQAIDNNP SQSSLNVQGG AIYAKTSLSI GSSDAGTSYI 
901:	FSGNSVSTGK SQTTGQIAGG AIYSPTVTLN CPATFSNNTA SMATPKTSSE DGSSGNSIKD 
961:	TIGGAIAGTA ITLSGVSRFS GNTADLGAAI GTLANANTPS ATSGSQNSIT EKITLENGSF 
1021:	IFERNQANKR GAIYSPSVSI KGNNITFNQN TSTHDGSAIY FTKDATIESL GSVLFTGNNV 
1081:	TATQASSATS GQNTNTANYG AAIFGDPGTT QSSQTDAILT LLASSGNITF SNNSLQNNQG 
1141:	DTPASKFCSI AGYVKLSLQA AKGKTISFFD CVHTSTKKIG STQNVYETLD INKEENSNPY 
1201:	TGTIVFSSEL HENKSYIPQN AILHNGTLVL KEKTELHVVS FEQKEGSKLI MKPGAVLSNQ 
1261:	NIANGALVIN GLTIDLSSMG TPQAGEIFSP PELRIVATTS SASGGSGVSS SIPTNPKRIS 
1321:	AAAPSGSAAT TPTMSENKVF LTGDLTLIDP NGNFYQNPML GSDLDVPLIK LPTNTSDVQV 
1381:	YDLTLSGDLF PQKGYMGTWT LDSNPQTGKL QARWTFDTYR RWVYIPRDNH FYANSILGSQ 
1441:	NSMIVVKQGL INNMLNNARF DDIAYNNFWV SGVGTFLAQQ GTPLSEEFSY YSRGTSVAID 
1501:	AKPRQDFILG AAFSKMVGKT KAIKKMHNYF HKGSEYSYQA SVYGGKFLYF LLNKQHGWAL 
1561:	PFLIQGVVSY GHIKHDTTTL YPSIHERNKG DWEDLGWLAD LRISMDLKEP SKDSSKRITV 
1621:	YGELEYSSIR QKQFTEIDYD PRHFDDCAYR NLSLPVGCAV EGAIMNCNIL MYNKLALAYM 
1681:	PSIYRNNPVC KYRVLSSNEA GQVICGVPTR TSARAEYSTQ LYLGPFWTLY GNYTIDVGMY 
1741:	TLSQMTSCGA RMIF