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1.B.12.2.5
Autotransporter, BapC of 909 aas with an established transmembrane β-barrel and a long α-structured passenger domain (Riaz et al. 2015).

Accession Number:V9BHF8
Protein Name:Autotransporter BapC
Length:909
Molecular Weight:95300.00
Species:Bordetella pertussis STO1-CHOC-0019 [1331279]
Substrate Protein virulence factor

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	PPPPFKPAPY VYFKPLGNDV VAERIRVEVH GDETLGVYVD SEHRSLTVRD STIDAYGKPP 
61:	SVDSPDYYGA AAVYAGTLNI ENSTVHHNYA AQPFEDAVGV GVTSLGDKAI LNVTDSEVSG 
121:	ARGAVIGWGG GEATFTDSVL RGSAFGLYAE MCDTCRDDDG TSPSIRVQGG VVQGGMGANN 
181:	VAVVATGSGK VAIENAELLG ASGMYATFGA QVDMKGGRIL AHNTNILGSQ GYADGPYGGV 
241:	VVTEDGQVNL EGAKVSATGL GAAGLWLLGD KDTSPRASLR NTDVHGEVAA IALGFNGEAN 
301:	ISGGSLSVED GAVLTTLTPD AVEYYYDYAL SMEHLPADAP LTPVRVTLSD GARASGETLI 
361:	AHGGLLPMTL RLSSGVDARG DIVTLPPSAP PDSAEQPDAE PEPDAELEPD AAAQSDAKAN 
421:	ARVMAQVDGG EPVAVPIPAP SHPDAPIDVF IDSGAQWRGM TKTVNALRIE DGTWTVTGSS 
481:	TVNSLHLQAG KVAYATPAES DGEFKHLRVK TLSGSGLFEM NASADLSDGD LLVVSDEASG 
541:	QHKVLVRGAG TEPTGVESLT LVELPEGSQT KFTLANRGGV VDAGAFRYRL TPDNGVWGLE 
601:	RTSQLSAVAN AALNTGGVGA ASSIWYAEGN ALSKRLGELR LDPGAGGFWG RTFAQKQQLD 
661:	NKAGRRFDQK VYGFELGADH AIAGQQGRWH VGGLLGYTRA RRSFIDDGAG HTDSAHIGAY 
721:	AAYVADNGFY FDSTLRASRF ENDFTVTATD AVSVRGKYRA NGVGATLEAG KRFTLHDGWF 
781:	VEPQSEVSLF HASGGTYRAA NNLSVKDEGG TSAVLRLGLA AGRRIDLGKD RVIQPYATLS 
841:	WLQEFKGVTT VRTNGYGLRT DLSGGRAELA LGLAAALGRG HQLYTSYEYA KGNKLTLPWT 
901:	FHLGYRYTW