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1.B.12.5.6
Autotransporter essential for virulence and biofilm formation of 1242 aas, Pfa1.  The passenger domain is a serine protease, cytotoxic to cultured fish cells (Hu et al. 2009).

Accession Number:C6G4G4
Protein Name:Autotransporter
Length:1242
Molecular Weight:131363.00
Species:Pseudomonas fluorescens [294]
Number of TMSs:1
Substrate Serine protease

Cross database links:

External Searches:

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  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MDVAGNGFIV SQRNRTPRFK TTPLTPIALG LALWLGHGSV ARADDNPYTP QVLESAFRTA 
61:	VASFGPETAV YKNLRFAYAD IVDLAAKDFA AQSGKFDSAL KQNYELQPEN LTIGAMLGDT 
121:	RRPLDYASRL DYYRSRLFSN SGRYTTNILD FSKAIIANLP AAKPYTYVEP GVSSNLSGQL 
181:	NAGQSWAGAT RDWSANAQTW KTPEAQVNSG LDRTNAYYAY ALGITGKGVN VGVLDSGILT 
241:	EHSEFQGKNA QGQDRVQAVT STGEYYATHP RYRLEVPSGE FKQGEPFSIP GEYDPAFNDG 
301:	HGTEMSGVLA ANRNGTGMHG IAFDANLFVA NTGGSDNDRY QGSNDLDYNA FMASYNALAA 
361:	KNVAIVNQSW GQSSRDDVEN HFGNVGDSAA QNLQDMTAAY RPFWDKAHAG HKTWMDAMAD 
421:	AARQNTFIQI ISAGNDSHGA NPDTNANLPF FKPDIEGKFL SITGYDETSA QVYNRCGTSK 
481:	WWCVMGVSGI PSAGPEGEII PNANGTSAAA PSVSGALALV MQRFPYMTPS QARDVLLTTS 
541:	SLQAPDGPDT PVGTLTGGRT YDNLQPVHDA PPGTPQVPGV VSGWGLPNLQ KAMQGPGQFF 
601:	GAVAVALPSG TRDIWANPIS DEAIRARRVE DAAEQATWAA TKAQKGWLNG LPANASADDQ 
661:	FEYDIGHARE QATLTRGQDA LTGSTYVGSL VKSGDGELVL EGQNSYSGST WVRGGKLSVD 
721:	GALTSAVTVD GSAVGMRNAD NGVMTTLGGT LAGNGTVGAL TVNNGGRVAP GHSIGTLRTG 
781:	DVMFNPGSVY AVEVGANGQS DQLQSNGVAT LNGGVVNVSL ENSPNLLTAT EARSLLGQQF 
841:	TILSASQGIQ GQFAASAPNY LFIGTALNYQ PNQLTLAIAR NQTTSASVAQ TRNERSVATA 
901:	AETLGAGSPV YESLLASDSA AQAREGFRQL SGQLHSDVAA AQMADSRYLR EAVNARLQQA 
961:	QALDSSAQID SRDNGGWVQL LGGRNNVSGD NNASGYSSST SGVLLGLDSE VNDGWRVGAA 
1021:	TGYTQSHLNG QSASADSDNY HLSVYGGKRF EAIALRLGGA STWHRLDTSR RVAYANQSDH 
1081:	AKADYNARTD QVFAEIGYTQ WTVFEPFADL TYLNYQSDSF KEKGGAAALH ASQQSQDATL 
1141:	STLGVRGHTQ LPLTSTSAVA LRGELGWEHQ FGDTDREASL KFAGSDTAFA VNSVPVARDG 
1201:	AVIKASAQMA LTKDTLVSLN YSGLLSNRGN NNGINAGFTF LF