TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.12.5.7
Putative autotransporter of 886 aas

Accession Number:Q7VYJ2
Protein Name:Autotransporter
Length:866
Molecular Weight:88937.00
Species:Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) [257313]
Number of TMSs:1
Substrate Protein virulence factor

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MRSARRRTPA RLAPLPAMLA AAGLLQSLGA TPAAAACAPT LAPASGQSVQ CDGAVVNQSV 
61:	EAAAGSQNVT ITVAPGALFS TNATRALSVD DRSRIVNEGT IQMAGGAGAS RGAMVGFGDN 
121:	NQLINRGSIT TSGSGVRGIS VPNVGSTGTL VDNSGSIRTQ GASAHGIAIN GPGNRVQNSG 
181:	AITVNGTDAK GVYLQGGSPA ANVLVNGGTI HARGASSNGI FGPDGVHVNT TNANGFHARV 
241:	ENLPGGRILS DHSYALRGQN GNDTFINAGY LQGHGGAGRD TAVYMGPQGT GTLILRTGSA 
301:	IAGLADGGGA ASHAYLEGSG TVDNRFANFR TLTMRGADWR WTSDAAFTES VDLRTGTFFL 
361:	AGTLASPANR LAAGAVLAGT GTLAGALRNA GEIRPGPNDG SGYGALTVRG DYTGAGGALR 
421:	VNTVLAGDGA ASDRLVIDGG HAGGSTPVTV VNRGGQGALT AADGILVVQA INGASSDAGA 
481:	FSLAAPLNAG AYEYRLYRGG ATGAAPDSWY LRSRAYLVED QLAGSLAEAE AIADDIGRRT 
541:	GERPSIEDTP LYRPEVALYS SIPMLARRMG LAQLGTFHER QGNQALLARD GERVAAWARA 
601:	YGGNSKQALD GDAQPGIDAR LAGVQLGQDL YSSVRPDGGQ HRFGLFGGYG QARGDTHGSA 
661:	GGERDAATGR LTIDGYSVGG YWTYVGPRGW YVDAVLANTW MDIDTDSKAG RDADTRGQAF 
721:	TASLESGYPL ALSERWTLEP QAQLIYQHTR VDGFSDAVSE VRIRDDNALT ARLGARLQGE 
781:	YAAAAQVWRP YAALNFWRTF SGENTVVLGE DSIDTRRGAT SLELAAGASV TLARSLALYG 
841:	RLAYATSIDS QYLRGASAQL GMRYTW