TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.14.16.9
Putative lipopolysaccharide export receptor, WbfB.  It is encoded in a gene cluster with LPS biosynthetic genes.

Accession Number:S5JA85
Protein Name:WbfB protein
Length:732
Molecular Weight:83186.00
Species:Vibrio parahaemolyticus O1:K33 str. CDC_K4557 [1338032]
Substrate LPS

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MNLIRTSLSL SLMGPALVWA QDVPFEAPPL QPSQMDFGGV GLMQMPTGRM APEGEFNFAV 
61:	TGSDEYLFYN VTLQVMPWLE TTIRYTMVND LFYSDDPSFS GDTKYTDKGI DFKVRLLQES 
121:	EYLPELSVGV RDFAGTGLFD GEFVAATKRY SNPNLGTFDF TLGMGWGYLG TRDNISNPTC 
181:	KLSDSFCERP SDFKGNGGSV DFERWFKGPA ALFGGVEYQT LHAPLRFKLE YDSNDYSEDF 
241:	PVVRGGVDMT PHTPWNFGVL YRLGHMADLR LSYERGDTLV AGVSLYTNFN DMPSFWRDTP 
301:	TPEVEDKQPE QLSDVDWERV TKELDKIAGY QNTQLYVEEN TVSVVGEQKK YRDRNEAHEK 
361:	AAAVLYNEMP DNIDTFTINE RSRGLIGDQT VISKEKYRDF AEVNYINPNI EDATSTSSEK 
421:	PQGKLAYDGF ERFDWGFSPK LAQTLGNPEE FYLFSVGLSG SASYWLTDNL EIGGSLYWDW 
481:	YNNYDKFNYV TPPDGTSIPR VRTMFRAYQN EHAVTMSNLQ LTWFQEYSDT MDQQFYAGYL 
541:	ESMFAGVGTE FLYRPKGANW AIGADVNLIS QRDPQSYFGV YDEKWQYVPE YGRPFQVVDK 
601:	GFTGFVSGYY YPQWDFLQDL MIQVDVGQFL AGDIGTQVNV SKQFKSGVIA GAFASISDLS 
661:	ADEFGEGSFT KGFYISIPFD IMTVKPSNNR AFFSWQPLTR DGGQKLGRKY SLIELTDERN 
721:	PWYQRPNASN AE