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1.B.15.1.1
Raffinose porin, RafY

Accession Number:P77076
Protein Name:RafY
Length:464
Molecular Weight:52902.00
Species:Escherichia coli [562]
Location1 / Topology2 / Orientation3: Cell outer membrane1
Substrate Raffinose

Cross database links:

References (1)

[1] “Identification of a new porin, RafY, encoded by raffinose plasmid pRSD2 of Escherichia coli.”  Ulmke C.et.al.   9294435

External Searches:

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  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MNKLLSGLSV FLLLAHNECA AKKRGLTLEQ RMALLEERLE VSEKRSEKAE RMLKSFDIEQ 
61:	HSEIRQIRSE QDKKDVNRYA VAESTQEKIS SPGVLLSGFN ELKFYGDVEF NIDAASKSGQ 
121:	LVMINSGVNS DSVNERWDLN GRILLGFDGA RKLDNGYFAG FSAQPLANIH GSVNIDDALL 
181:	FFGKKDKWKV KVGRFEAYDM FPLNQDTFIE YSGNTANDIY ADGRGYIYMM KEGRGRSNAG 
241:	GNFLISKQLD NWYFELNTLL EDGTSLYNDG NYHGRDMERQ KNVAYLRPVI AWSPTEEFTV 
301:	SAAMEANVVN NAYGYTDSKG NFVDQSDRTG YGMSMTWNGL KTDPENGIVV NLNTAYLDAN 
361:	NEKDFTAGIN ALWKRFELGY IYAHNKIDEF SGVVCDNDCW IDDERSYTIH TIHASYRFAN 
421:	VMDMENFNIY LGTYYSILDS DKMYINDSST ESRYGVRVRF KYLF