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1.B.17.3.1
NodT2 outer membrane exporter of lipooligosaccharides

Accession Number:P24145
Protein Name:NodT2 aka NODT
Length:467
Molecular Weight:50344.00
Species:Rhizobium leguminosarum (biovar trifolii) [386]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell membrane1 / Lipid-anchor2
Substrate Lipooligosaccharides

Cross database links:

Pfam: PF02321   

Gene Ontology

GO:0005886 C:plasma membrane
GO:0008289 F:lipid binding
GO:0005215 F:transporter activity
GO:0009877 P:nodulation
GO:0006810 P:transport

References (2)

[1] “Molecular characterization of the nodulation gene, nodT, from two biovars of Rhizobium leguminosarum.”  Surin B.P.et.al.   2338917
[2] “Molecular linkage of the nif/fix and nod gene regions in Rhizobium leguminosarum biovar trifolii.”  Iismaa S.E.et.al.   2622339

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MRFTRYTTPF FSLLLSGCVV GPNYAPPEMP LPAKFSEGGV TSNGDVTVVA WWTAFNDPML 
61:	TSYVEQGISQ NLDVQQAIER IDLAAANVTI AEASALPDLT LSGSHTVSGQ KGKLRKQTYT 
121:	SNTSTGELSL SWLLDFGVYK RNTESAEAAL DAAYASVDMA KLAFINDIIS SYVDARYYQR 
181:	RLALSQANLK SRRETFELTK SKFAAGAVAR MDVVRAEGLV QSTLAEIPSL DANFRISAHR 
241:	IATLLGKPAG SMVEEIAKGS NQPAFRADVN VGIPADIIRN RPDIRKAERD LADSTAQIGV 
301:	AEAKLFPSIT LSGSISPSGG INERGVYGNL TPWSFGPKLK LPILDGGGLR ADVDSAKSKA 
361:	TVSYLKWKSR VLNAIEQVEN ALVAMQREGR TVRALKREVE IAQETLRLST SSYKDGASSL 
421:	LDLLEAQRSL SVTQASLARA VQEWAKLYAV LNIAIGSGYN PVAKAGL