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1.B.19.1.2
The quorum sensing acyl homoserine lactone porin, OprB

Accession Number:A4LTL1
Protein Name:Carbohydrate porin, OprB family
Length:504
Molecular Weight:53137.00
Species:Burkholderia pseudomallei 305 [425067]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Mitochondrion1
Substrate Acyl homoserine lactone

Cross database links:

Pfam: PF04966   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005215 F:transporter activity
GO:0006810 P:transport

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MKKKTLHQML VKSGVASGLP LLLSLGIVQP ALAQASSPTA APAENAAPPA PATRAPDGVP 
61:	GGNGATAVQT DAAPTGFWDR SNLFGDMGGL RTKLGDHGIT LNLQETSEYL RNLSGGTSRG 
121:	GAYDGLTQFG FSVDTEKAIG LPGGTFNVSG LQIHGTSLTA RNLQLLQTAS GIEAEATTRL 
181:	WELWYQQSFA NGRADVKVGQ QSLDQEFMVS QYASTFINAT FGWPVLPAVD MPAGGPAYPL 
241:	SSLGVRLRAK PSDAWTVMAG VFDGNPAGGV GDAQQLNRHG TNFNLRNGAL FIGELQYALN 
301:	APPADPKAPQ AGLPGMYKLG VWYNSERFAD PRYDTNGVPL ADPASNGVAA THRGNYGFYA 
361:	VADQMVWRPG ADSPRSLNVF ARVMGAPGDR NAVDFTLNAG VTLKAPFAGR DNDTAGLAVS 
421:	YAKIGSRARG ADGDTGVFQT PGYPVRRAET LIEATYQYQV TPWWQLQGDF QYAFRPGGGI 
481:	PNPNEPGSRI GNEAIVGVRT TITF