TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.19.1.9
Porin of 425 aas, OprB, required for virulence and biofilm formation (Ficarra et al. 2016). It is a sugar-selective porin (Bae et al. 2018).

Accession Number:H8FL42
Protein Name:Porin
Length:425
Molecular Weight:46231.00
Species:Xanthomonas citri pv. mangiferaeindicae LMG 941 [1156940]
Location1 / Topology2 / Orientation3: Cell outer membrane1 / Multi-pass membrane protein2
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MTALAPRRAR PRLLCLSLTL ALTPLAHAQD AADAFKLKLG YTGEAASMID GGRKSGDAYA 
61:	GQLMVGTDVD MDRLFGWNGA TVKLYVTNRH GTNLANSSIG NSTSVQEIYG GQGTRLANFT 
121:	LLQKLFNDRL ELEAGRSVAN IHFLGSDLCQ YFQGNSACGN PTFVFRTSNF TYWPVSSWAA 
181:	HATAWVTPKV YLHVGAYEVN PIQAQDGQHG LNWSTNDTTG VVVPYAVGYK NKGGDGSMAA 
241:	MYELGGWQDN SDYTDPLRDR NGDPAVLSGL GYENRQGRSG LFARFEQQVT NPDPSGTRGL 
301:	TVFGAVLQST GGQAIEDHFI QLGLVQKGTF ASRPQDNIAF VITQQKYSDE AIENLRLARA 
361:	SAGGTGTPAD NQIMMELSYG IQVTKRLRIA PNLHYVINPD QFNEPTRTTD LKNALIAGMR 
421:	IDWNL