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1.B.6.1.25
Putative OmpA porin of 345 aas and one N-terminal TMS. Its gene is adjacent to an autoinducer exporter-like protein (2.A.86.1.11) (Poppleton et al. 2017).

Accession Number:ACZ24151.1
Protein Name:ACZ24151.1 OmpA/MotB domain protein [Veillonella parvula DSM 2008]
Length:346
Molecular Weight:
Species:Veillonella parvula DSM 2008 [479436]
Number of TMSs:1
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MNKKLLALLA VAAVGVSVAG ATPQTQFNKG EFQVDLGASD SKAKTKAWTS DAKWNFDGGV 
61:	TYAFTDKTAL QYQYHGLNDK MFGTSYSDRM QEVNLVQSLN KNFAVYGGYA HISGDTFPKA 
121:	NNIAQLGVIG KANLGSKVDV YGKAGVGTKR TTTWEAGLGY KVNQDWDINA GYRYINTKRD 
181:	DKSNISFQGP VVGLSYRFGG HKSVAPVYTP APAPVYTPAP APTVEAPAYK TPKLDYYVQS 
241:	IYFDSDQDVA RADQYPNLTA AVNAANQYSQ DQVKLMGNAD TDANPQYNIA LSERRVQHVA 
301:	QYLVNHGVSA DRLIGIANGD VKPVATNSTA AGKAENRRVD VYIHR