TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.8.1.18
VDAC2 of 281 aas, 1 N-terminal α-TMS and 19 β-TMSs.  Forms channels much like those of VDAC1 (Guardiani et al. 2018).

Accession Number:P40478
Protein Name:Mitochondrial outer membrane protein porin 2
Length:281
Molecular Weight:31177.00
Species:Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [559292]
Location1 / Topology2 / Orientation3: Mitochondrion outer membrane1
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MALRFFNDIS RDVNGLFNRD FFHTNPLSLN ISTTTENGVN FTLKAKQGVT EGPIQTSVEG 
61:	RFYDRKEGVS LSQSWSNQNR LNTRIEFSKI APGWKGDVNA FLTPQSIKNA KFNLSYAQKS 
121:	FAARTSIDIL QPKDFVGSVT LGHRGFVGGT DIAYDTAAGL CARYAMSIGY LAREYSFILS 
181:	TNNRQCATAS FFQNVNRYLQ VGTKATLQSK TSSNMNIEFV TRYVPDSISQ VKAKIADSGL 
241:	TTLSYKRNLN KDISLGVGMS FNALQLTEPV HKFGWSLSFS P